Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.59■□□□□ 0.57
DffbO54788 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
DffbO54788 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
DffbO54788 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DffbO54788 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.59■□□□□ 0.57
DffbO54788 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DffbO54788 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
DffbO54788 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
DffbO54788 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.58■□□□□ 0.57
DffbO54788 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
DffbO54788 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
DffbO54788 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
DffbO54788 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.58■□□□□ 0.56
DffbO54788 Terc-201ENSMUST00000082862 423 ntBASIC18.58■□□□□ 0.56
DffbO54788 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
DffbO54788 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.57■□□□□ 0.56
DffbO54788 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DffbO54788 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.56■□□□□ 0.56
DffbO54788 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.56■□□□□ 0.56
DffbO54788 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.56■□□□□ 0.56
DffbO54788 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
DffbO54788 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
DffbO54788 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.56■□□□□ 0.56
DffbO54788 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
DffbO54788 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
DffbO54788 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.55■□□□□ 0.56
DffbO54788 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
DffbO54788 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DffbO54788 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.55■□□□□ 0.56
DffbO54788 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
DffbO54788 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
DffbO54788 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DffbO54788 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DffbO54788 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
DffbO54788 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DffbO54788 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DffbO54788 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DffbO54788 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DffbO54788 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
DffbO54788 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DffbO54788 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.54■□□□□ 0.56
DffbO54788 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
DffbO54788 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DffbO54788 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DffbO54788 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DffbO54788 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DffbO54788 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
DffbO54788 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
DffbO54788 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DffbO54788 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
DffbO54788 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
DffbO54788 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DffbO54788 Gm7432-201ENSMUST00000210343 879 ntBASIC18.52■□□□□ 0.56
DffbO54788 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DffbO54788 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
DffbO54788 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
DffbO54788 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.52■□□□□ 0.55
DffbO54788 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
DffbO54788 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.52■□□□□ 0.55
DffbO54788 Gm32051-202ENSMUST00000197905 2385 ntBASIC18.52■□□□□ 0.55
DffbO54788 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
DffbO54788 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.51■□□□□ 0.55
DffbO54788 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
DffbO54788 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
DffbO54788 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
DffbO54788 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.5■□□□□ 0.55
DffbO54788 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
DffbO54788 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DffbO54788 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DffbO54788 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
DffbO54788 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
DffbO54788 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DffbO54788 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
DffbO54788 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DffbO54788 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
DffbO54788 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DffbO54788 Gm11599-201ENSMUST00000118720 878 ntBASIC18.49■□□□□ 0.55
DffbO54788 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
DffbO54788 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
DffbO54788 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
DffbO54788 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
DffbO54788 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DffbO54788 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
DffbO54788 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DffbO54788 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DffbO54788 Gm22567-201ENSMUST00000175542 342 ntBASIC18.47■□□□□ 0.55
DffbO54788 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.47■□□□□ 0.55
DffbO54788 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
DffbO54788 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
DffbO54788 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DffbO54788 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
DffbO54788 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.46■□□□□ 0.55
DffbO54788 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DffbO54788 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DffbO54788 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
DffbO54788 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
DffbO54788 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DffbO54788 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DffbO54788 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DffbO54788 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms