Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Gm4799-201ENSMUST00000095396 657 ntBASIC19.93■□□□□ 0.78
Hps1O08983 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hps1O08983 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Hps1O08983 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hps1O08983 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Hps1O08983 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Hps1O08983 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hps1O08983 Gm16437-201ENSMUST00000025669 507 ntBASIC19.92■□□□□ 0.78
Hps1O08983 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Hps1O08983 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.92■□□□□ 0.78
Hps1O08983 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hps1O08983 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hps1O08983 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hps1O08983 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.91■□□□□ 0.78
Hps1O08983 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Hps1O08983 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hps1O08983 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Hps1O08983 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Hps1O08983 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hps1O08983 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hps1O08983 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Hps1O08983 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.9■□□□□ 0.78
Hps1O08983 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Hps1O08983 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hps1O08983 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hps1O08983 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.89■□□□□ 0.77
Hps1O08983 Gm15039-201ENSMUST00000118914 875 ntBASIC19.89■□□□□ 0.77
Hps1O08983 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Hps1O08983 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.89■□□□□ 0.77
Hps1O08983 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hps1O08983 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hps1O08983 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Hps1O08983 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Hps1O08983 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.88■□□□□ 0.77
Hps1O08983 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Hps1O08983 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hps1O08983 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hps1O08983 Gm7332-201ENSMUST00000118351 454 ntBASIC19.87■□□□□ 0.77
Hps1O08983 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hps1O08983 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hps1O08983 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hps1O08983 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Hps1O08983 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hps1O08983 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hps1O08983 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.86■□□□□ 0.77
Hps1O08983 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.86■□□□□ 0.77
Hps1O08983 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Hps1O08983 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hps1O08983 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Hps1O08983 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
Hps1O08983 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
Hps1O08983 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.85■□□□□ 0.77
Hps1O08983 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hps1O08983 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hps1O08983 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.84■□□□□ 0.77
Hps1O08983 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.84■□□□□ 0.77
Hps1O08983 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hps1O08983 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hps1O08983 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hps1O08983 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hps1O08983 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hps1O08983 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hps1O08983 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hps1O08983 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hps1O08983 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hps1O08983 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.83■□□□□ 0.77
Hps1O08983 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hps1O08983 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hps1O08983 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hps1O08983 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hps1O08983 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.82■□□□□ 0.76
Hps1O08983 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hps1O08983 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hps1O08983 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Hps1O08983 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hps1O08983 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
Hps1O08983 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hps1O08983 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.81■□□□□ 0.76
Hps1O08983 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hps1O08983 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hps1O08983 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hps1O08983 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hps1O08983 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hps1O08983 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hps1O08983 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hps1O08983 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Hps1O08983 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.8■□□□□ 0.76
Hps1O08983 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hps1O08983 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Hps1O08983 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Hps1O08983 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hps1O08983 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hps1O08983 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Hps1O08983 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hps1O08983 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hps1O08983 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hps1O08983 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.78■□□□□ 0.76
Hps1O08983 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hps1O08983 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hps1O08983 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms