Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Shisa8J3QNX5 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Shisa8J3QNX5 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Shisa8J3QNX5 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Shisa8J3QNX5 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Shisa8J3QNX5 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.77■□□□□ 0.76
Shisa8J3QNX5 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Shisa8J3QNX5 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Shisa8J3QNX5 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Shisa8J3QNX5 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Shisa8J3QNX5 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shisa8J3QNX5 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Shisa8J3QNX5 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.76■□□□□ 0.75
Shisa8J3QNX5 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.76■□□□□ 0.75
Shisa8J3QNX5 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Shisa8J3QNX5 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Shisa8J3QNX5 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Shisa8J3QNX5 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shisa8J3QNX5 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Shisa8J3QNX5 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Shisa8J3QNX5 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Shisa8J3QNX5 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Shisa8J3QNX5 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
Shisa8J3QNX5 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Shisa8J3QNX5 Gm9910-201ENSMUST00000195385 1550 ntBASIC19.74■□□□□ 0.75
Shisa8J3QNX5 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Shisa8J3QNX5 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.74■□□□□ 0.75
Shisa8J3QNX5 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Shisa8J3QNX5 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shisa8J3QNX5 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shisa8J3QNX5 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shisa8J3QNX5 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shisa8J3QNX5 Gm6821-201ENSMUST00000107540 542 ntBASIC19.73■□□□□ 0.75
Shisa8J3QNX5 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Shisa8J3QNX5 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shisa8J3QNX5 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shisa8J3QNX5 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.73■□□□□ 0.75
Shisa8J3QNX5 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Shisa8J3QNX5 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shisa8J3QNX5 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shisa8J3QNX5 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shisa8J3QNX5 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shisa8J3QNX5 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Shisa8J3QNX5 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
Shisa8J3QNX5 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shisa8J3QNX5 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.72■□□□□ 0.75
Shisa8J3QNX5 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.72■□□□□ 0.75
Shisa8J3QNX5 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shisa8J3QNX5 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shisa8J3QNX5 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shisa8J3QNX5 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Shisa8J3QNX5 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.71■□□□□ 0.75
Shisa8J3QNX5 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Shisa8J3QNX5 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.71■□□□□ 0.75
Shisa8J3QNX5 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Shisa8J3QNX5 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Shisa8J3QNX5 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shisa8J3QNX5 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.7■□□□□ 0.74
Shisa8J3QNX5 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Shisa8J3QNX5 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shisa8J3QNX5 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.7■□□□□ 0.74
Shisa8J3QNX5 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Shisa8J3QNX5 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Shisa8J3QNX5 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.69■□□□□ 0.74
Shisa8J3QNX5 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Shisa8J3QNX5 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Shisa8J3QNX5 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shisa8J3QNX5 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shisa8J3QNX5 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shisa8J3QNX5 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shisa8J3QNX5 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Shisa8J3QNX5 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.68■□□□□ 0.74
Shisa8J3QNX5 Gm4799-201ENSMUST00000095396 657 ntBASIC19.68■□□□□ 0.74
Shisa8J3QNX5 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.68■□□□□ 0.74
Shisa8J3QNX5 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shisa8J3QNX5 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Shisa8J3QNX5 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Shisa8J3QNX5 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shisa8J3QNX5 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shisa8J3QNX5 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Shisa8J3QNX5 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Shisa8J3QNX5 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Shisa8J3QNX5 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.67■□□□□ 0.74
Shisa8J3QNX5 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Shisa8J3QNX5 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.66■□□□□ 0.74
Shisa8J3QNX5 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Shisa8J3QNX5 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Shisa8J3QNX5 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.66■□□□□ 0.74
Shisa8J3QNX5 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shisa8J3QNX5 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shisa8J3QNX5 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shisa8J3QNX5 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shisa8J3QNX5 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.65■□□□□ 0.74
Shisa8J3QNX5 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Shisa8J3QNX5 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Shisa8J3QNX5 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.65■□□□□ 0.74
Shisa8J3QNX5 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
Shisa8J3QNX5 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Shisa8J3QNX5 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.64■□□□□ 0.73
Shisa8J3QNX5 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms