Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Etf1-202ENSMUST00000180351 108 ntBASIC26.62■■□□□ 1.85
Ube4aE9Q735 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC26.61■■□□□ 1.85
Ube4aE9Q735 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Ube4aE9Q735 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC26.61■■□□□ 1.85
Ube4aE9Q735 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Ube4aE9Q735 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC26.61■■□□□ 1.85
Ube4aE9Q735 Gm5131-201ENSMUST00000212776 1238 ntBASIC26.61■■□□□ 1.85
Ube4aE9Q735 Nsd1-206ENSMUST00000224918 1001 ntBASIC26.61■■□□□ 1.85
Ube4aE9Q735 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC26.61■■□□□ 1.85
Ube4aE9Q735 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Ube4aE9Q735 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Ube4aE9Q735 Gm28731-201ENSMUST00000185564 1569 ntBASIC26.6■■□□□ 1.85
Ube4aE9Q735 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Ube4aE9Q735 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Ube4aE9Q735 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC26.58■■□□□ 1.85
Ube4aE9Q735 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
Ube4aE9Q735 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
Ube4aE9Q735 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC26.58■■□□□ 1.85
Ube4aE9Q735 Gm28536-201ENSMUST00000190971 1317 ntBASIC26.58■■□□□ 1.85
Ube4aE9Q735 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ube4aE9Q735 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ube4aE9Q735 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ube4aE9Q735 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ube4aE9Q735 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
Ube4aE9Q735 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ube4aE9Q735 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ube4aE9Q735 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Ube4aE9Q735 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC26.57■■□□□ 1.84
Ube4aE9Q735 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Ube4aE9Q735 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Ube4aE9Q735 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC26.56■■□□□ 1.84
Ube4aE9Q735 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Ube4aE9Q735 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Ube4aE9Q735 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ube4aE9Q735 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ube4aE9Q735 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ube4aE9Q735 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ube4aE9Q735 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Ube4aE9Q735 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Ube4aE9Q735 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC26.53■■□□□ 1.84
Ube4aE9Q735 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC26.53■■□□□ 1.84
Ube4aE9Q735 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC26.53■■□□□ 1.84
Ube4aE9Q735 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC26.53■■□□□ 1.84
Ube4aE9Q735 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ube4aE9Q735 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ube4aE9Q735 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ube4aE9Q735 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Ube4aE9Q735 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Ube4aE9Q735 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC26.52■■□□□ 1.84
Ube4aE9Q735 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC26.52■■□□□ 1.84
Ube4aE9Q735 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC26.51■■□□□ 1.83
Ube4aE9Q735 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
Ube4aE9Q735 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ube4aE9Q735 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC26.5■■□□□ 1.83
Ube4aE9Q735 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC26.5■■□□□ 1.83
Ube4aE9Q735 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ube4aE9Q735 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Ube4aE9Q735 AC153890.1-201ENSMUST00000220021 2469 ntBASIC26.5■■□□□ 1.83
Ube4aE9Q735 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Ube4aE9Q735 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Ube4aE9Q735 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
Ube4aE9Q735 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ube4aE9Q735 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC26.48■■□□□ 1.83
Ube4aE9Q735 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ube4aE9Q735 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Ube4aE9Q735 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Ube4aE9Q735 Gm15039-201ENSMUST00000118914 875 ntBASIC26.47■■□□□ 1.83
Ube4aE9Q735 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
Ube4aE9Q735 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ube4aE9Q735 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Ube4aE9Q735 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ube4aE9Q735 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Ube4aE9Q735 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC26.46■■□□□ 1.83
Ube4aE9Q735 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ube4aE9Q735 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Ube4aE9Q735 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.45■■□□□ 1.83
Ube4aE9Q735 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC26.45■■□□□ 1.82
Ube4aE9Q735 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC26.45■■□□□ 1.82
Ube4aE9Q735 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC26.45■■□□□ 1.82
Ube4aE9Q735 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC26.45■■□□□ 1.82
Ube4aE9Q735 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC26.45■■□□□ 1.82
Ube4aE9Q735 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Ube4aE9Q735 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Ube4aE9Q735 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Ube4aE9Q735 Gm7417-201ENSMUST00000192950 473 ntBASIC26.44■■□□□ 1.82
Ube4aE9Q735 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Ube4aE9Q735 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Ube4aE9Q735 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Ube4aE9Q735 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Ube4aE9Q735 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC26.43■■□□□ 1.82
Ube4aE9Q735 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC26.43■■□□□ 1.82
Ube4aE9Q735 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Ube4aE9Q735 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC26.42■■□□□ 1.82
Ube4aE9Q735 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Ube4aE9Q735 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Ube4aE9Q735 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Ube4aE9Q735 Gm6934-201ENSMUST00000194780 1905 ntBASIC26.41■■□□□ 1.82
Ube4aE9Q735 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ube4aE9Q735 Gm11847-201ENSMUST00000125165 1119 ntBASIC26.41■■□□□ 1.82
Ube4aE9Q735 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC26.41■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms