Protein–RNA interactions for Protein: E9Q368

Tarbp1, TAR RNA-binding protein 1, mousemouse

Predictions only

Length 1,579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tarbp1E9Q368 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Tarbp1E9Q368 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Tarbp1E9Q368 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC31.46■■■□□ 2.63
Tarbp1E9Q368 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC31.46■■■□□ 2.63
Tarbp1E9Q368 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
Tarbp1E9Q368 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Tarbp1E9Q368 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Tarbp1E9Q368 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC31.45■■■□□ 2.63
Tarbp1E9Q368 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC31.45■■■□□ 2.62
Tarbp1E9Q368 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Tarbp1E9Q368 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC31.44■■■□□ 2.62
Tarbp1E9Q368 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC31.44■■■□□ 2.62
Tarbp1E9Q368 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Tarbp1E9Q368 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Tarbp1E9Q368 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Tarbp1E9Q368 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
Tarbp1E9Q368 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
Tarbp1E9Q368 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC31.42■■■□□ 2.62
Tarbp1E9Q368 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Tarbp1E9Q368 Etf1-202ENSMUST00000180351 108 ntBASIC31.42■■■□□ 2.62
Tarbp1E9Q368 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC31.42■■■□□ 2.62
Tarbp1E9Q368 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Tarbp1E9Q368 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Tarbp1E9Q368 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Tarbp1E9Q368 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Tarbp1E9Q368 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC31.41■■■□□ 2.62
Tarbp1E9Q368 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Tarbp1E9Q368 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC31.4■■■□□ 2.62
Tarbp1E9Q368 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC31.4■■■□□ 2.62
Tarbp1E9Q368 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
Tarbp1E9Q368 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC31.39■■■□□ 2.62
Tarbp1E9Q368 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC31.39■■■□□ 2.62
Tarbp1E9Q368 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Tarbp1E9Q368 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
Tarbp1E9Q368 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Tarbp1E9Q368 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC31.38■■■□□ 2.61
Tarbp1E9Q368 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
Tarbp1E9Q368 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Tarbp1E9Q368 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Tarbp1E9Q368 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC31.37■■■□□ 2.61
Tarbp1E9Q368 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Tarbp1E9Q368 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
Tarbp1E9Q368 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Tarbp1E9Q368 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC31.36■■■□□ 2.61
Tarbp1E9Q368 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
Tarbp1E9Q368 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Tarbp1E9Q368 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Tarbp1E9Q368 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Tarbp1E9Q368 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC31.34■■■□□ 2.61
Tarbp1E9Q368 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC31.34■■■□□ 2.61
Tarbp1E9Q368 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Tarbp1E9Q368 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC31.33■■■□□ 2.61
Tarbp1E9Q368 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Tarbp1E9Q368 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Tarbp1E9Q368 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC31.32■■■□□ 2.6
Tarbp1E9Q368 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC31.32■■■□□ 2.6
Tarbp1E9Q368 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Tarbp1E9Q368 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Tarbp1E9Q368 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC31.31■■■□□ 2.6
Tarbp1E9Q368 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Tarbp1E9Q368 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Tarbp1E9Q368 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC31.3■■■□□ 2.6
Tarbp1E9Q368 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC31.3■■■□□ 2.6
Tarbp1E9Q368 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC31.29■■■□□ 2.6
Tarbp1E9Q368 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Tarbp1E9Q368 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
Tarbp1E9Q368 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC31.29■■■□□ 2.6
Tarbp1E9Q368 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC31.29■■■□□ 2.6
Tarbp1E9Q368 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC31.28■■■□□ 2.6
Tarbp1E9Q368 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
Tarbp1E9Q368 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC31.28■■■□□ 2.6
Tarbp1E9Q368 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
Tarbp1E9Q368 Gm28536-201ENSMUST00000190971 1317 ntBASIC31.28■■■□□ 2.6
Tarbp1E9Q368 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Tarbp1E9Q368 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC31.27■■■□□ 2.6
Tarbp1E9Q368 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC31.26■■■□□ 2.6
Tarbp1E9Q368 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.59
Tarbp1E9Q368 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC31.26■■■□□ 2.59
Tarbp1E9Q368 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC31.26■■■□□ 2.59
Tarbp1E9Q368 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
Tarbp1E9Q368 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Tarbp1E9Q368 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Tarbp1E9Q368 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC31.25■■■□□ 2.59
Tarbp1E9Q368 AC153890.1-201ENSMUST00000220021 2469 ntBASIC31.24■■■□□ 2.59
Tarbp1E9Q368 Gm40881-201ENSMUST00000223397 166 ntBASIC31.24■■■□□ 2.59
Tarbp1E9Q368 Gm28731-201ENSMUST00000185564 1569 ntBASIC31.23■■■□□ 2.59
Tarbp1E9Q368 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Tarbp1E9Q368 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Tarbp1E9Q368 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Tarbp1E9Q368 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Tarbp1E9Q368 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC31.21■■■□□ 2.59
Tarbp1E9Q368 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Tarbp1E9Q368 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Tarbp1E9Q368 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Tarbp1E9Q368 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
Tarbp1E9Q368 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC31.2■■■□□ 2.58
Tarbp1E9Q368 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Tarbp1E9Q368 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC31.2■■■□□ 2.58
Tarbp1E9Q368 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Tarbp1E9Q368 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Retrieved 100 of 76,532 protein–RNA pairs in 104.2 ms