Protein–RNA interactions for Protein: E9PZM4

Chd2, Chromodomain-helicase-DNA-binding protein 2, mousemouse

Known RBP Predictions only

Length 1,827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd2E9PZM4 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
Chd2E9PZM4 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC31.2■■■□□ 2.59
Chd2E9PZM4 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC31.2■■■□□ 2.59
Chd2E9PZM4 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
Chd2E9PZM4 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Chd2E9PZM4 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC31.19■■■□□ 2.58
Chd2E9PZM4 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC31.19■■■□□ 2.58
Chd2E9PZM4 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
Chd2E9PZM4 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Chd2E9PZM4 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC31.18■■■□□ 2.58
Chd2E9PZM4 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Chd2E9PZM4 Gm12821-201ENSMUST00000120022 600 ntBASIC31.17■■■□□ 2.58
Chd2E9PZM4 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Chd2E9PZM4 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Chd2E9PZM4 Gm10399-202ENSMUST00000202768 748 ntBASIC31.16■■■□□ 2.58
Chd2E9PZM4 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Chd2E9PZM4 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Chd2E9PZM4 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Chd2E9PZM4 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC31.15■■■□□ 2.58
Chd2E9PZM4 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Chd2E9PZM4 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Chd2E9PZM4 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Chd2E9PZM4 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC31.14■■■□□ 2.58
Chd2E9PZM4 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC31.14■■■□□ 2.58
Chd2E9PZM4 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Chd2E9PZM4 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Chd2E9PZM4 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Chd2E9PZM4 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Chd2E9PZM4 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC31.13■■■□□ 2.57
Chd2E9PZM4 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC31.12■■■□□ 2.57
Chd2E9PZM4 Slc35b2-207ENSMUST00000226086 850 ntBASIC31.12■■■□□ 2.57
Chd2E9PZM4 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Chd2E9PZM4 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Chd2E9PZM4 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Chd2E9PZM4 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Chd2E9PZM4 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Chd2E9PZM4 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
Chd2E9PZM4 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Chd2E9PZM4 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Chd2E9PZM4 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Chd2E9PZM4 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Chd2E9PZM4 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
Chd2E9PZM4 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
Chd2E9PZM4 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC31.1■■■□□ 2.57
Chd2E9PZM4 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Chd2E9PZM4 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Chd2E9PZM4 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Chd2E9PZM4 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Chd2E9PZM4 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Chd2E9PZM4 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Chd2E9PZM4 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Chd2E9PZM4 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC31.08■■■□□ 2.57
Chd2E9PZM4 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Chd2E9PZM4 Fezf2-202ENSMUST00000224023 1917 ntBASIC31.07■■■□□ 2.56
Chd2E9PZM4 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Chd2E9PZM4 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
Chd2E9PZM4 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC31.07■■■□□ 2.56
Chd2E9PZM4 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC31.07■■■□□ 2.56
Chd2E9PZM4 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Chd2E9PZM4 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC31.06■■■□□ 2.56
Chd2E9PZM4 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Chd2E9PZM4 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Chd2E9PZM4 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Chd2E9PZM4 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
Chd2E9PZM4 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC31.05■■■□□ 2.56
Chd2E9PZM4 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC31.05■■■□□ 2.56
Chd2E9PZM4 Golgb1-201ENSMUST00000023534 498 ntBASIC31.05■■■□□ 2.56
Chd2E9PZM4 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC31.05■■■□□ 2.56
Chd2E9PZM4 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Chd2E9PZM4 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Chd2E9PZM4 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Chd2E9PZM4 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Chd2E9PZM4 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Chd2E9PZM4 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Chd2E9PZM4 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Chd2E9PZM4 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC31.04■■■□□ 2.56
Chd2E9PZM4 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Chd2E9PZM4 Gm11847-201ENSMUST00000125165 1119 ntBASIC31.03■■■□□ 2.56
Chd2E9PZM4 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC31.03■■■□□ 2.56
Chd2E9PZM4 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Chd2E9PZM4 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC31.02■■■□□ 2.56
Chd2E9PZM4 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC31.02■■■□□ 2.56
Chd2E9PZM4 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC31.01■■■□□ 2.56
Chd2E9PZM4 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC31.01■■■□□ 2.56
Chd2E9PZM4 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
Chd2E9PZM4 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC31■■■□□ 2.55
Chd2E9PZM4 AC117245.4-201ENSMUST00000217388 1646 ntBASIC31■■■□□ 2.55
Chd2E9PZM4 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC30.99■■■□□ 2.55
Chd2E9PZM4 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Chd2E9PZM4 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Chd2E9PZM4 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC30.97■■■□□ 2.55
Chd2E9PZM4 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
Chd2E9PZM4 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC30.96■■■□□ 2.55
Chd2E9PZM4 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC30.96■■■□□ 2.55
Chd2E9PZM4 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC30.96■■■□□ 2.55
Chd2E9PZM4 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
Chd2E9PZM4 Gm8093-201ENSMUST00000128935 1892 ntBASIC30.95■■■□□ 2.55
Chd2E9PZM4 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC30.95■■■□□ 2.54
Chd2E9PZM4 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Chd2E9PZM4 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC30.94■■■□□ 2.54
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms