Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx6-2D3Z4R4 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx6-2D3Z4R4 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx6-2D3Z4R4 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx6-2D3Z4R4 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx6-2D3Z4R4 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx6-2D3Z4R4 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Nkx6-2D3Z4R4 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Nkx6-2D3Z4R4 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx6-2D3Z4R4 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx6-2D3Z4R4 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.68■□□□□ 0.42
Nkx6-2D3Z4R4 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx6-2D3Z4R4 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx6-2D3Z4R4 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx6-2D3Z4R4 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx6-2D3Z4R4 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx6-2D3Z4R4 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.68■□□□□ 0.42
Nkx6-2D3Z4R4 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx6-2D3Z4R4 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.68■□□□□ 0.42
Nkx6-2D3Z4R4 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Nkx6-2D3Z4R4 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx6-2D3Z4R4 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx6-2D3Z4R4 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx6-2D3Z4R4 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Nkx6-2D3Z4R4 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Nkx6-2D3Z4R4 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Nkx6-2D3Z4R4 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx6-2D3Z4R4 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx6-2D3Z4R4 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx6-2D3Z4R4 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx6-2D3Z4R4 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx6-2D3Z4R4 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Nkx6-2D3Z4R4 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx6-2D3Z4R4 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx6-2D3Z4R4 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Nkx6-2D3Z4R4 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx6-2D3Z4R4 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx6-2D3Z4R4 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Nkx6-2D3Z4R4 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx6-2D3Z4R4 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx6-2D3Z4R4 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx6-2D3Z4R4 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx6-2D3Z4R4 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Nkx6-2D3Z4R4 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.65■□□□□ 0.42
Nkx6-2D3Z4R4 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx6-2D3Z4R4 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Nkx6-2D3Z4R4 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Nkx6-2D3Z4R4 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Nkx6-2D3Z4R4 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Nkx6-2D3Z4R4 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Nkx6-2D3Z4R4 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Nkx6-2D3Z4R4 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Nkx6-2D3Z4R4 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Nkx6-2D3Z4R4 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.64■□□□□ 0.41
Nkx6-2D3Z4R4 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx6-2D3Z4R4 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Nkx6-2D3Z4R4 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx6-2D3Z4R4 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx6-2D3Z4R4 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx6-2D3Z4R4 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Nkx6-2D3Z4R4 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx6-2D3Z4R4 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Nkx6-2D3Z4R4 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx6-2D3Z4R4 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Nkx6-2D3Z4R4 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx6-2D3Z4R4 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx6-2D3Z4R4 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.62■□□□□ 0.41
Nkx6-2D3Z4R4 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx6-2D3Z4R4 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Nkx6-2D3Z4R4 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Nkx6-2D3Z4R4 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Nkx6-2D3Z4R4 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx6-2D3Z4R4 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC17.61■□□□□ 0.41
Nkx6-2D3Z4R4 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx6-2D3Z4R4 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Nkx6-2D3Z4R4 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx6-2D3Z4R4 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx6-2D3Z4R4 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx6-2D3Z4R4 Gm37847-201ENSMUST00000192163 1497 ntBASIC17.6■□□□□ 0.41
Nkx6-2D3Z4R4 Gm31748-201ENSMUST00000194938 1497 ntBASIC17.6■□□□□ 0.41
Nkx6-2D3Z4R4 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx6-2D3Z4R4 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Nkx6-2D3Z4R4 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Nkx6-2D3Z4R4 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx6-2D3Z4R4 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx6-2D3Z4R4 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx6-2D3Z4R4 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Nkx6-2D3Z4R4 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Nkx6-2D3Z4R4 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx6-2D3Z4R4 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx6-2D3Z4R4 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Nkx6-2D3Z4R4 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Nkx6-2D3Z4R4 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Nkx6-2D3Z4R4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Nkx6-2D3Z4R4 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx6-2D3Z4R4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC17.58■□□□□ 0.4
Nkx6-2D3Z4R4 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx6-2D3Z4R4 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Nkx6-2D3Z4R4 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.58■□□□□ 0.4
Nkx6-2D3Z4R4 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms