Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Gm3543D3Z235 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.57■□□□□ 0.72
Gm3543D3Z235 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm3543D3Z235 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Gm3543D3Z235 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm3543D3Z235 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm3543D3Z235 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.56■□□□□ 0.72
Gm3543D3Z235 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Gm3543D3Z235 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm3543D3Z235 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm3543D3Z235 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.56■□□□□ 0.72
Gm3543D3Z235 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Gm3543D3Z235 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Gm3543D3Z235 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm3543D3Z235 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm3543D3Z235 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.55■□□□□ 0.72
Gm3543D3Z235 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm3543D3Z235 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Gm3543D3Z235 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm3543D3Z235 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm3543D3Z235 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm3543D3Z235 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Gm3543D3Z235 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm3543D3Z235 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm3543D3Z235 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm3543D3Z235 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.54■□□□□ 0.72
Gm3543D3Z235 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm3543D3Z235 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm3543D3Z235 Gm5921-201ENSMUST00000075898 882 ntBASIC19.54■□□□□ 0.72
Gm3543D3Z235 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Gm3543D3Z235 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Gm3543D3Z235 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm3543D3Z235 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm3543D3Z235 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm3543D3Z235 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm3543D3Z235 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Gm3543D3Z235 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Gm3543D3Z235 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm3543D3Z235 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm3543D3Z235 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm3543D3Z235 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Gm3543D3Z235 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.52■□□□□ 0.72
Gm3543D3Z235 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.52■□□□□ 0.72
Gm3543D3Z235 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Gm3543D3Z235 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Gm3543D3Z235 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Gm3543D3Z235 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm3543D3Z235 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm3543D3Z235 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Gm3543D3Z235 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Gm3543D3Z235 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Gm3543D3Z235 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.51■□□□□ 0.71
Gm3543D3Z235 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm3543D3Z235 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm3543D3Z235 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm3543D3Z235 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Gm3543D3Z235 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm3543D3Z235 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Gm3543D3Z235 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.5■□□□□ 0.71
Gm3543D3Z235 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.5■□□□□ 0.71
Gm3543D3Z235 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm3543D3Z235 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm3543D3Z235 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Gm3543D3Z235 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Gm3543D3Z235 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm3543D3Z235 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Gm3543D3Z235 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm3543D3Z235 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Gm3543D3Z235 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Gm3543D3Z235 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm3543D3Z235 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm3543D3Z235 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm3543D3Z235 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm3543D3Z235 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Gm3543D3Z235 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Gm3543D3Z235 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Gm3543D3Z235 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm3543D3Z235 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm3543D3Z235 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Gm3543D3Z235 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.48■□□□□ 0.71
Gm3543D3Z235 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Gm3543D3Z235 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.48■□□□□ 0.71
Gm3543D3Z235 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3543D3Z235 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3543D3Z235 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3543D3Z235 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3543D3Z235 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3543D3Z235 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Gm3543D3Z235 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm3543D3Z235 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm3543D3Z235 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm3543D3Z235 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.46■□□□□ 0.71
Gm3543D3Z235 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Gm3543D3Z235 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm3543D3Z235 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm3543D3Z235 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm3543D3Z235 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Gm3543D3Z235 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Gm3543D3Z235 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Gm3543D3Z235 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms