Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv17A0A140T8P8 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv17A0A140T8P8 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trbv17A0A140T8P8 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC16.57■□□□□ 0.24
Trbv17A0A140T8P8 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trbv17A0A140T8P8 AC117769.4-201ENSMUST00000225679 685 ntBASIC16.57■□□□□ 0.24
Trbv17A0A140T8P8 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.57■□□□□ 0.24
Trbv17A0A140T8P8 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
Trbv17A0A140T8P8 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trbv17A0A140T8P8 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Trbv17A0A140T8P8 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv17A0A140T8P8 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trbv17A0A140T8P8 Gm7199-201ENSMUST00000118327 1485 ntBASIC16.55■□□□□ 0.24
Trbv17A0A140T8P8 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trbv17A0A140T8P8 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv17A0A140T8P8 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv17A0A140T8P8 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC16.55■□□□□ 0.24
Trbv17A0A140T8P8 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv17A0A140T8P8 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Trbv17A0A140T8P8 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trbv17A0A140T8P8 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv17A0A140T8P8 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv17A0A140T8P8 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv17A0A140T8P8 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC16.54■□□□□ 0.24
Trbv17A0A140T8P8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv17A0A140T8P8 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv17A0A140T8P8 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv17A0A140T8P8 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv17A0A140T8P8 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trbv17A0A140T8P8 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv17A0A140T8P8 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC16.53■□□□□ 0.24
Trbv17A0A140T8P8 AC151971.4-201ENSMUST00000214717 704 ntBASIC16.53■□□□□ 0.24
Trbv17A0A140T8P8 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv17A0A140T8P8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trbv17A0A140T8P8 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv17A0A140T8P8 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trbv17A0A140T8P8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16.52■□□□□ 0.24
Trbv17A0A140T8P8 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC16.52■□□□□ 0.24
Trbv17A0A140T8P8 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trbv17A0A140T8P8 Gm6934-201ENSMUST00000194780 1905 ntBASIC16.51■□□□□ 0.23
Trbv17A0A140T8P8 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trbv17A0A140T8P8 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv17A0A140T8P8 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv17A0A140T8P8 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trbv17A0A140T8P8 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Trbv17A0A140T8P8 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv17A0A140T8P8 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv17A0A140T8P8 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC16.5■□□□□ 0.23
Trbv17A0A140T8P8 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv17A0A140T8P8 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv17A0A140T8P8 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv17A0A140T8P8 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv17A0A140T8P8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trbv17A0A140T8P8 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv17A0A140T8P8 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv17A0A140T8P8 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC16.49■□□□□ 0.23
Trbv17A0A140T8P8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv17A0A140T8P8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC16.49■□□□□ 0.23
Trbv17A0A140T8P8 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Trbv17A0A140T8P8 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv17A0A140T8P8 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv17A0A140T8P8 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trbv17A0A140T8P8 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv17A0A140T8P8 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv17A0A140T8P8 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv17A0A140T8P8 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv17A0A140T8P8 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trbv17A0A140T8P8 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC16.48■□□□□ 0.23
Trbv17A0A140T8P8 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv17A0A140T8P8 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trbv17A0A140T8P8 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trbv17A0A140T8P8 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trbv17A0A140T8P8 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv17A0A140T8P8 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
Trbv17A0A140T8P8 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv17A0A140T8P8 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv17A0A140T8P8 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv17A0A140T8P8 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv17A0A140T8P8 Gm14523-201ENSMUST00000117260 558 ntBASIC16.47■□□□□ 0.23
Trbv17A0A140T8P8 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC16.47■□□□□ 0.23
Trbv17A0A140T8P8 Gm12366-201ENSMUST00000121722 873 ntBASIC16.47■□□□□ 0.23
Trbv17A0A140T8P8 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC16.47■□□□□ 0.23
Trbv17A0A140T8P8 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC16.47■□□□□ 0.23
Trbv17A0A140T8P8 Gm5786-201ENSMUST00000085368 882 ntBASIC16.47■□□□□ 0.23
Trbv17A0A140T8P8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv17A0A140T8P8 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trbv17A0A140T8P8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC16.46■□□□□ 0.23
Trbv17A0A140T8P8 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC16.46■□□□□ 0.23
Trbv17A0A140T8P8 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trbv17A0A140T8P8 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trbv17A0A140T8P8 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trbv17A0A140T8P8 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
Trbv17A0A140T8P8 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv17A0A140T8P8 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv17A0A140T8P8 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trbv17A0A140T8P8 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv17A0A140T8P8 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Trbv17A0A140T8P8 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trbv17A0A140T8P8 Gm7332-201ENSMUST00000118351 454 ntBASIC16.45■□□□□ 0.22
Trbv17A0A140T8P8 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms