Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.1■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.09■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.09■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.09■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
Trav15d-2-dv6d-2A0A0G2JGQ7 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC19.08■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.08■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm44428-201ENSMUST00000204474 874 ntBASIC19.08■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm6311-201ENSMUST00000073790 878 ntBASIC19.07■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.07■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC19.04■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.04■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.03■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.03■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.03■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.03■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.02■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.02■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.02■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav15d-2-dv6d-2A0A0G2JGQ7 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trav15d-2-dv6d-2A0A0G2JGQ7 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Trav15d-2-dv6d-2A0A0G2JGQ7 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.01■□□□□ 0.63
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.01■□□□□ 0.63
Trav15d-2-dv6d-2A0A0G2JGQ7 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav15d-2-dv6d-2A0A0G2JGQ7 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Trav15d-2-dv6d-2A0A0G2JGQ7 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19■□□□□ 0.63
Trav15d-2-dv6d-2A0A0G2JGQ7 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trav15d-2-dv6d-2A0A0G2JGQ7 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19■□□□□ 0.63
Trav15d-2-dv6d-2A0A0G2JGQ7 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trav15d-2-dv6d-2A0A0G2JGQ7 AC117769.4-201ENSMUST00000225679 685 ntBASIC19■□□□□ 0.63
Trav15d-2-dv6d-2A0A0G2JGQ7 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav15d-2-dv6d-2A0A0G2JGQ7 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trav15d-2-dv6d-2A0A0G2JGQ7 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav15d-2-dv6d-2A0A0G2JGQ7 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Trav15d-2-dv6d-2A0A0G2JGQ7 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav15d-2-dv6d-2A0A0G2JGQ7 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trav15d-2-dv6d-2A0A0G2JGQ7 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trav15d-2-dv6d-2A0A0G2JGQ7 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav15d-2-dv6d-2A0A0G2JGQ7 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav15d-2-dv6d-2A0A0G2JGQ7 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav15d-2-dv6d-2A0A0G2JGQ7 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms