Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trav23A0A0G2JG17 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav23A0A0G2JG17 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.68■□□□□ 0.42
Trav23A0A0G2JG17 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav23A0A0G2JG17 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.68■□□□□ 0.42
Trav23A0A0G2JG17 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trav23A0A0G2JG17 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav23A0A0G2JG17 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trav23A0A0G2JG17 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav23A0A0G2JG17 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav23A0A0G2JG17 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trav23A0A0G2JG17 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trav23A0A0G2JG17 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Trav23A0A0G2JG17 Gm10420-201ENSMUST00000121713 882 ntBASIC17.67■□□□□ 0.42
Trav23A0A0G2JG17 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.67■□□□□ 0.42
Trav23A0A0G2JG17 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav23A0A0G2JG17 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav23A0A0G2JG17 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trav23A0A0G2JG17 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav23A0A0G2JG17 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav23A0A0G2JG17 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav23A0A0G2JG17 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav23A0A0G2JG17 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav23A0A0G2JG17 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav23A0A0G2JG17 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav23A0A0G2JG17 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav23A0A0G2JG17 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav23A0A0G2JG17 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav23A0A0G2JG17 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trav23A0A0G2JG17 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav23A0A0G2JG17 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Trav23A0A0G2JG17 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav23A0A0G2JG17 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav23A0A0G2JG17 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.64■□□□□ 0.41
Trav23A0A0G2JG17 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav23A0A0G2JG17 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Trav23A0A0G2JG17 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav23A0A0G2JG17 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav23A0A0G2JG17 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.63■□□□□ 0.41
Trav23A0A0G2JG17 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav23A0A0G2JG17 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav23A0A0G2JG17 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav23A0A0G2JG17 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav23A0A0G2JG17 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav23A0A0G2JG17 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav23A0A0G2JG17 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav23A0A0G2JG17 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.62■□□□□ 0.41
Trav23A0A0G2JG17 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.62■□□□□ 0.41
Trav23A0A0G2JG17 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trav23A0A0G2JG17 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Trav23A0A0G2JG17 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.61■□□□□ 0.41
Trav23A0A0G2JG17 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav23A0A0G2JG17 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav23A0A0G2JG17 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trav23A0A0G2JG17 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trav23A0A0G2JG17 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav23A0A0G2JG17 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.6■□□□□ 0.41
Trav23A0A0G2JG17 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav23A0A0G2JG17 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC17.6■□□□□ 0.41
Trav23A0A0G2JG17 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav23A0A0G2JG17 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav23A0A0G2JG17 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav23A0A0G2JG17 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav23A0A0G2JG17 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav23A0A0G2JG17 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Trav23A0A0G2JG17 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Trav23A0A0G2JG17 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.59■□□□□ 0.41
Trav23A0A0G2JG17 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav23A0A0G2JG17 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav23A0A0G2JG17 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Trav23A0A0G2JG17 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Trav23A0A0G2JG17 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Trav23A0A0G2JG17 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav23A0A0G2JG17 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav23A0A0G2JG17 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Trav23A0A0G2JG17 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Trav23A0A0G2JG17 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav23A0A0G2JG17 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav23A0A0G2JG17 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav23A0A0G2JG17 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.57■□□□□ 0.4
Trav23A0A0G2JG17 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav23A0A0G2JG17 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav23A0A0G2JG17 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav23A0A0G2JG17 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav23A0A0G2JG17 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Trav23A0A0G2JG17 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav23A0A0G2JG17 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav23A0A0G2JG17 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav23A0A0G2JG17 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav23A0A0G2JG17 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav23A0A0G2JG17 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav23A0A0G2JG17 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav23A0A0G2JG17 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav23A0A0G2JG17 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav23A0A0G2JG17 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trav23A0A0G2JG17 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav23A0A0G2JG17 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav23A0A0G2JG17 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav23A0A0G2JG17 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Trav23A0A0G2JG17 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms