Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trav23A0A0G2JG17 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav23A0A0G2JG17 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.68■□□□□ 0.42
Trav23A0A0G2JG17 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav23A0A0G2JG17 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.68■□□□□ 0.42
Trav23A0A0G2JG17 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trav23A0A0G2JG17 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trav23A0A0G2JG17 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trav23A0A0G2JG17 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav23A0A0G2JG17 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav23A0A0G2JG17 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trav23A0A0G2JG17 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trav23A0A0G2JG17 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Trav23A0A0G2JG17 Gm10420-201ENSMUST00000121713 882 ntBASIC17.67■□□□□ 0.42
Trav23A0A0G2JG17 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.67■□□□□ 0.42
Trav23A0A0G2JG17 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav23A0A0G2JG17 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav23A0A0G2JG17 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trav23A0A0G2JG17 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav23A0A0G2JG17 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav23A0A0G2JG17 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav23A0A0G2JG17 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav23A0A0G2JG17 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav23A0A0G2JG17 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav23A0A0G2JG17 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav23A0A0G2JG17 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav23A0A0G2JG17 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav23A0A0G2JG17 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav23A0A0G2JG17 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trav23A0A0G2JG17 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav23A0A0G2JG17 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Trav23A0A0G2JG17 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav23A0A0G2JG17 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav23A0A0G2JG17 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.64■□□□□ 0.41
Trav23A0A0G2JG17 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav23A0A0G2JG17 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Trav23A0A0G2JG17 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav23A0A0G2JG17 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav23A0A0G2JG17 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.63■□□□□ 0.41
Trav23A0A0G2JG17 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav23A0A0G2JG17 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav23A0A0G2JG17 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav23A0A0G2JG17 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav23A0A0G2JG17 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav23A0A0G2JG17 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav23A0A0G2JG17 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav23A0A0G2JG17 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.62■□□□□ 0.41
Trav23A0A0G2JG17 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.62■□□□□ 0.41
Trav23A0A0G2JG17 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trav23A0A0G2JG17 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Trav23A0A0G2JG17 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.61■□□□□ 0.41
Trav23A0A0G2JG17 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav23A0A0G2JG17 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav23A0A0G2JG17 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trav23A0A0G2JG17 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trav23A0A0G2JG17 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav23A0A0G2JG17 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.6■□□□□ 0.41
Trav23A0A0G2JG17 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav23A0A0G2JG17 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC17.6■□□□□ 0.41
Trav23A0A0G2JG17 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav23A0A0G2JG17 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav23A0A0G2JG17 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav23A0A0G2JG17 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav23A0A0G2JG17 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav23A0A0G2JG17 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Trav23A0A0G2JG17 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Trav23A0A0G2JG17 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.59■□□□□ 0.41
Trav23A0A0G2JG17 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav23A0A0G2JG17 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav23A0A0G2JG17 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Trav23A0A0G2JG17 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Trav23A0A0G2JG17 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Trav23A0A0G2JG17 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav23A0A0G2JG17 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav23A0A0G2JG17 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Trav23A0A0G2JG17 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.58■□□□□ 0.4
Trav23A0A0G2JG17 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav23A0A0G2JG17 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav23A0A0G2JG17 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav23A0A0G2JG17 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.57■□□□□ 0.4
Trav23A0A0G2JG17 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav23A0A0G2JG17 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav23A0A0G2JG17 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav23A0A0G2JG17 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav23A0A0G2JG17 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
Trav23A0A0G2JG17 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav23A0A0G2JG17 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav23A0A0G2JG17 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav23A0A0G2JG17 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav23A0A0G2JG17 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav23A0A0G2JG17 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav23A0A0G2JG17 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trav23A0A0G2JG17 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav23A0A0G2JG17 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav23A0A0G2JG17 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trav23A0A0G2JG17 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav23A0A0G2JG17 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav23A0A0G2JG17 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav23A0A0G2JG17 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Trav23A0A0G2JG17 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms