Protein–RNA interactions for Protein: A0A0G2JEW2

Tcrg-V3, T cell receptor gamma, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V3A0A0G2JEW2 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.16■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 Gm5812-201ENSMUST00000061073 957 ntBASIC21.15■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Tcrg-V3A0A0G2JEW2 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Tcrg-V3A0A0G2JEW2 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Tcrg-V3A0A0G2JEW2 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tcrg-V3A0A0G2JEW2 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Tcrg-V3A0A0G2JEW2 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.13■□□□□ 0.97
Tcrg-V3A0A0G2JEW2 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tcrg-V3A0A0G2JEW2 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Tcrg-V3A0A0G2JEW2 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tcrg-V3A0A0G2JEW2 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.12■□□□□ 0.97
Tcrg-V3A0A0G2JEW2 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Tcrg-V3A0A0G2JEW2 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tcrg-V3A0A0G2JEW2 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Tcrg-V3A0A0G2JEW2 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.11■□□□□ 0.97
Tcrg-V3A0A0G2JEW2 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.11■□□□□ 0.97
Tcrg-V3A0A0G2JEW2 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Tcrg-V3A0A0G2JEW2 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Tcrg-V3A0A0G2JEW2 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Tcrg-V3A0A0G2JEW2 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tcrg-V3A0A0G2JEW2 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.1■□□□□ 0.97
Tcrg-V3A0A0G2JEW2 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tcrg-V3A0A0G2JEW2 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.1■□□□□ 0.97
Tcrg-V3A0A0G2JEW2 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Tcrg-V3A0A0G2JEW2 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.09■□□□□ 0.97
Tcrg-V3A0A0G2JEW2 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.09■□□□□ 0.97
Tcrg-V3A0A0G2JEW2 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tcrg-V3A0A0G2JEW2 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Tcrg-V3A0A0G2JEW2 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
Tcrg-V3A0A0G2JEW2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Tcrg-V3A0A0G2JEW2 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Tcrg-V3A0A0G2JEW2 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Tcrg-V3A0A0G2JEW2 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Tcrg-V3A0A0G2JEW2 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Tcrg-V3A0A0G2JEW2 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Tcrg-V3A0A0G2JEW2 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tcrg-V3A0A0G2JEW2 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tcrg-V3A0A0G2JEW2 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Tcrg-V3A0A0G2JEW2 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
Tcrg-V3A0A0G2JEW2 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tcrg-V3A0A0G2JEW2 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Tcrg-V3A0A0G2JEW2 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Tcrg-V3A0A0G2JEW2 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Tcrg-V3A0A0G2JEW2 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tcrg-V3A0A0G2JEW2 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tcrg-V3A0A0G2JEW2 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.06■□□□□ 0.96
Tcrg-V3A0A0G2JEW2 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Tcrg-V3A0A0G2JEW2 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Tcrg-V3A0A0G2JEW2 Gm22567-201ENSMUST00000175542 342 ntBASIC21.06■□□□□ 0.96
Tcrg-V3A0A0G2JEW2 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tcrg-V3A0A0G2JEW2 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC21.06■□□□□ 0.96
Tcrg-V3A0A0G2JEW2 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.05■□□□□ 0.96
Tcrg-V3A0A0G2JEW2 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Tcrg-V3A0A0G2JEW2 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.05■□□□□ 0.96
Tcrg-V3A0A0G2JEW2 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Tcrg-V3A0A0G2JEW2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.05■□□□□ 0.96
Tcrg-V3A0A0G2JEW2 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tcrg-V3A0A0G2JEW2 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Tcrg-V3A0A0G2JEW2 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tcrg-V3A0A0G2JEW2 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tcrg-V3A0A0G2JEW2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Tcrg-V3A0A0G2JEW2 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tcrg-V3A0A0G2JEW2 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Tcrg-V3A0A0G2JEW2 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tcrg-V3A0A0G2JEW2 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tcrg-V3A0A0G2JEW2 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tcrg-V3A0A0G2JEW2 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tcrg-V3A0A0G2JEW2 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tcrg-V3A0A0G2JEW2 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tcrg-V3A0A0G2JEW2 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tcrg-V3A0A0G2JEW2 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Tcrg-V3A0A0G2JEW2 Gm15546-201ENSMUST00000122095 826 ntBASIC21.02■□□□□ 0.96
Tcrg-V3A0A0G2JEW2 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.02■□□□□ 0.96
Tcrg-V3A0A0G2JEW2 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tcrg-V3A0A0G2JEW2 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Tcrg-V3A0A0G2JEW2 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Tcrg-V3A0A0G2JEW2 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.95
Tcrg-V3A0A0G2JEW2 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tcrg-V3A0A0G2JEW2 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tcrg-V3A0A0G2JEW2 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.01■□□□□ 0.95
Tcrg-V3A0A0G2JEW2 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tcrg-V3A0A0G2JEW2 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tcrg-V3A0A0G2JEW2 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tcrg-V3A0A0G2JEW2 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.01■□□□□ 0.95
Tcrg-V3A0A0G2JEW2 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Tcrg-V3A0A0G2JEW2 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tcrg-V3A0A0G2JEW2 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tcrg-V3A0A0G2JEW2 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms