Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Gm10420-201ENSMUST00000121713 882 ntBASIC16.3■□□□□ 0.2
Trav9-4A0A0B4J1K2 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trav9-4A0A0B4J1K2 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav9-4A0A0B4J1K2 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav9-4A0A0B4J1K2 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav9-4A0A0B4J1K2 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav9-4A0A0B4J1K2 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav9-4A0A0B4J1K2 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC16.29■□□□□ 0.2
Trav9-4A0A0B4J1K2 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trav9-4A0A0B4J1K2 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trav9-4A0A0B4J1K2 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav9-4A0A0B4J1K2 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav9-4A0A0B4J1K2 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav9-4A0A0B4J1K2 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav9-4A0A0B4J1K2 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav9-4A0A0B4J1K2 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav9-4A0A0B4J1K2 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav9-4A0A0B4J1K2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav9-4A0A0B4J1K2 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trav9-4A0A0B4J1K2 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav9-4A0A0B4J1K2 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trav9-4A0A0B4J1K2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav9-4A0A0B4J1K2 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trav9-4A0A0B4J1K2 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav9-4A0A0B4J1K2 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav9-4A0A0B4J1K2 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav9-4A0A0B4J1K2 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC16.27■□□□□ 0.2
Trav9-4A0A0B4J1K2 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav9-4A0A0B4J1K2 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav9-4A0A0B4J1K2 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav9-4A0A0B4J1K2 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Trav9-4A0A0B4J1K2 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav9-4A0A0B4J1K2 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trav9-4A0A0B4J1K2 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC16.27■□□□□ 0.19
Trav9-4A0A0B4J1K2 AC117245.4-201ENSMUST00000217388 1646 ntBASIC16.27■□□□□ 0.19
Trav9-4A0A0B4J1K2 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav9-4A0A0B4J1K2 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC16.26■□□□□ 0.19
Trav9-4A0A0B4J1K2 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav9-4A0A0B4J1K2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav9-4A0A0B4J1K2 Gm5067-201ENSMUST00000170449 1009 ntBASIC16.26■□□□□ 0.19
Trav9-4A0A0B4J1K2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trav9-4A0A0B4J1K2 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trav9-4A0A0B4J1K2 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav9-4A0A0B4J1K2 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trav9-4A0A0B4J1K2 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC16.25■□□□□ 0.19
Trav9-4A0A0B4J1K2 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Trav9-4A0A0B4J1K2 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trav9-4A0A0B4J1K2 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Trav9-4A0A0B4J1K2 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trav9-4A0A0B4J1K2 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav9-4A0A0B4J1K2 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav9-4A0A0B4J1K2 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Trav9-4A0A0B4J1K2 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trav9-4A0A0B4J1K2 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav9-4A0A0B4J1K2 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav9-4A0A0B4J1K2 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav9-4A0A0B4J1K2 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trav9-4A0A0B4J1K2 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trav9-4A0A0B4J1K2 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Trav9-4A0A0B4J1K2 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav9-4A0A0B4J1K2 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Trav9-4A0A0B4J1K2 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav9-4A0A0B4J1K2 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav9-4A0A0B4J1K2 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Trav9-4A0A0B4J1K2 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav9-4A0A0B4J1K2 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav9-4A0A0B4J1K2 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trav9-4A0A0B4J1K2 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav9-4A0A0B4J1K2 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav9-4A0A0B4J1K2 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav9-4A0A0B4J1K2 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC16.22■□□□□ 0.19
Trav9-4A0A0B4J1K2 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav9-4A0A0B4J1K2 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav9-4A0A0B4J1K2 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav9-4A0A0B4J1K2 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Trav9-4A0A0B4J1K2 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC16.22■□□□□ 0.19
Trav9-4A0A0B4J1K2 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav9-4A0A0B4J1K2 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav9-4A0A0B4J1K2 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav9-4A0A0B4J1K2 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav9-4A0A0B4J1K2 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Trav9-4A0A0B4J1K2 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav9-4A0A0B4J1K2 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trav9-4A0A0B4J1K2 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav9-4A0A0B4J1K2 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trav9-4A0A0B4J1K2 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav9-4A0A0B4J1K2 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Trav9-4A0A0B4J1K2 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC16.21■□□□□ 0.18
Trav9-4A0A0B4J1K2 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trav9-4A0A0B4J1K2 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav9-4A0A0B4J1K2 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav9-4A0A0B4J1K2 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Trav9-4A0A0B4J1K2 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav9-4A0A0B4J1K2 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav9-4A0A0B4J1K2 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav9-4A0A0B4J1K2 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav9-4A0A0B4J1K2 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav9-4A0A0B4J1K2 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.19■□□□□ 0.18
Trav9-4A0A0B4J1K2 Gm43592-201ENSMUST00000196922 1165 ntBASIC16.19■□□□□ 0.18
Trav9-4A0A0B4J1K2 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms