Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trbv20A0A0B4J1H5 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Trbv20A0A0B4J1H5 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.49■□□□□ 0.71
Trbv20A0A0B4J1H5 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Trbv20A0A0B4J1H5 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trbv20A0A0B4J1H5 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trbv20A0A0B4J1H5 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trbv20A0A0B4J1H5 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trbv20A0A0B4J1H5 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trbv20A0A0B4J1H5 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trbv20A0A0B4J1H5 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trbv20A0A0B4J1H5 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trbv20A0A0B4J1H5 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trbv20A0A0B4J1H5 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trbv20A0A0B4J1H5 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trbv20A0A0B4J1H5 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trbv20A0A0B4J1H5 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trbv20A0A0B4J1H5 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trbv20A0A0B4J1H5 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Trbv20A0A0B4J1H5 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trbv20A0A0B4J1H5 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv20A0A0B4J1H5 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv20A0A0B4J1H5 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv20A0A0B4J1H5 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv20A0A0B4J1H5 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.46■□□□□ 0.71
Trbv20A0A0B4J1H5 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Trbv20A0A0B4J1H5 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv20A0A0B4J1H5 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Trbv20A0A0B4J1H5 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Trbv20A0A0B4J1H5 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trbv20A0A0B4J1H5 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trbv20A0A0B4J1H5 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trbv20A0A0B4J1H5 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trbv20A0A0B4J1H5 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Trbv20A0A0B4J1H5 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.44■□□□□ 0.7
Trbv20A0A0B4J1H5 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Trbv20A0A0B4J1H5 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trbv20A0A0B4J1H5 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trbv20A0A0B4J1H5 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Trbv20A0A0B4J1H5 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trbv20A0A0B4J1H5 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trbv20A0A0B4J1H5 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Trbv20A0A0B4J1H5 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv20A0A0B4J1H5 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.43■□□□□ 0.7
Trbv20A0A0B4J1H5 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv20A0A0B4J1H5 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv20A0A0B4J1H5 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv20A0A0B4J1H5 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv20A0A0B4J1H5 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv20A0A0B4J1H5 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Trbv20A0A0B4J1H5 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv20A0A0B4J1H5 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trbv20A0A0B4J1H5 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trbv20A0A0B4J1H5 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Trbv20A0A0B4J1H5 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trbv20A0A0B4J1H5 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trbv20A0A0B4J1H5 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trbv20A0A0B4J1H5 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trbv20A0A0B4J1H5 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trbv20A0A0B4J1H5 Nkain2-201ENSMUST00000092602 558 ntBASIC19.41■□□□□ 0.7
Trbv20A0A0B4J1H5 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trbv20A0A0B4J1H5 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Trbv20A0A0B4J1H5 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trbv20A0A0B4J1H5 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv20A0A0B4J1H5 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv20A0A0B4J1H5 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC19.4■□□□□ 0.7
Trbv20A0A0B4J1H5 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv20A0A0B4J1H5 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Trbv20A0A0B4J1H5 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trbv20A0A0B4J1H5 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trbv20A0A0B4J1H5 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Trbv20A0A0B4J1H5 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trbv20A0A0B4J1H5 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Trbv20A0A0B4J1H5 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trbv20A0A0B4J1H5 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trbv20A0A0B4J1H5 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Trbv20A0A0B4J1H5 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trbv20A0A0B4J1H5 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trbv20A0A0B4J1H5 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trbv20A0A0B4J1H5 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trbv20A0A0B4J1H5 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trbv20A0A0B4J1H5 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trbv20A0A0B4J1H5 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Trbv20A0A0B4J1H5 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trbv20A0A0B4J1H5 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Trbv20A0A0B4J1H5 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trbv20A0A0B4J1H5 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trbv20A0A0B4J1H5 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trbv20A0A0B4J1H5 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.36■□□□□ 0.69
Trbv20A0A0B4J1H5 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trbv20A0A0B4J1H5 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv20A0A0B4J1H5 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv20A0A0B4J1H5 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv20A0A0B4J1H5 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv20A0A0B4J1H5 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.35■□□□□ 0.69
Trbv20A0A0B4J1H5 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Trbv20A0A0B4J1H5 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv20A0A0B4J1H5 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Trbv20A0A0B4J1H5 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv20A0A0B4J1H5 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms