Protein–RNA interactions for Protein: A0A0B4J1G8

Trbv2, T cell receptor beta, variable 2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv2A0A0B4J1G8 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.35■□□□□ 0.69
Trbv2A0A0B4J1G8 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv2A0A0B4J1G8 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv2A0A0B4J1G8 Gm6821-201ENSMUST00000107540 542 ntBASIC19.35■□□□□ 0.69
Trbv2A0A0B4J1G8 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.35■□□□□ 0.69
Trbv2A0A0B4J1G8 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv2A0A0B4J1G8 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv2A0A0B4J1G8 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv2A0A0B4J1G8 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv2A0A0B4J1G8 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv2A0A0B4J1G8 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv2A0A0B4J1G8 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv2A0A0B4J1G8 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trbv2A0A0B4J1G8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trbv2A0A0B4J1G8 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.34■□□□□ 0.69
Trbv2A0A0B4J1G8 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trbv2A0A0B4J1G8 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trbv2A0A0B4J1G8 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.34■□□□□ 0.69
Trbv2A0A0B4J1G8 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trbv2A0A0B4J1G8 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trbv2A0A0B4J1G8 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trbv2A0A0B4J1G8 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trbv2A0A0B4J1G8 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.34■□□□□ 0.69
Trbv2A0A0B4J1G8 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.33■□□□□ 0.69
Trbv2A0A0B4J1G8 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trbv2A0A0B4J1G8 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trbv2A0A0B4J1G8 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trbv2A0A0B4J1G8 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trbv2A0A0B4J1G8 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trbv2A0A0B4J1G8 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trbv2A0A0B4J1G8 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Trbv2A0A0B4J1G8 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trbv2A0A0B4J1G8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trbv2A0A0B4J1G8 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.31■□□□□ 0.68
Trbv2A0A0B4J1G8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trbv2A0A0B4J1G8 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trbv2A0A0B4J1G8 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.31■□□□□ 0.68
Trbv2A0A0B4J1G8 Terc-201ENSMUST00000082862 423 ntBASIC19.31■□□□□ 0.68
Trbv2A0A0B4J1G8 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trbv2A0A0B4J1G8 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trbv2A0A0B4J1G8 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trbv2A0A0B4J1G8 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trbv2A0A0B4J1G8 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trbv2A0A0B4J1G8 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trbv2A0A0B4J1G8 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trbv2A0A0B4J1G8 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.3■□□□□ 0.68
Trbv2A0A0B4J1G8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.3■□□□□ 0.68
Trbv2A0A0B4J1G8 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.3■□□□□ 0.68
Trbv2A0A0B4J1G8 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.3■□□□□ 0.68
Trbv2A0A0B4J1G8 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trbv2A0A0B4J1G8 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trbv2A0A0B4J1G8 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Trbv2A0A0B4J1G8 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Trbv2A0A0B4J1G8 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trbv2A0A0B4J1G8 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.28■□□□□ 0.68
Trbv2A0A0B4J1G8 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Trbv2A0A0B4J1G8 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trbv2A0A0B4J1G8 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trbv2A0A0B4J1G8 Mir3960-201ENSMUST00000198213 73 ntBASIC19.28■□□□□ 0.68
Trbv2A0A0B4J1G8 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Trbv2A0A0B4J1G8 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trbv2A0A0B4J1G8 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Trbv2A0A0B4J1G8 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trbv2A0A0B4J1G8 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trbv2A0A0B4J1G8 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trbv2A0A0B4J1G8 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Trbv2A0A0B4J1G8 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trbv2A0A0B4J1G8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Trbv2A0A0B4J1G8 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trbv2A0A0B4J1G8 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.26■□□□□ 0.67
Trbv2A0A0B4J1G8 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trbv2A0A0B4J1G8 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Trbv2A0A0B4J1G8 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv2A0A0B4J1G8 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Trbv2A0A0B4J1G8 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv2A0A0B4J1G8 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv2A0A0B4J1G8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv2A0A0B4J1G8 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv2A0A0B4J1G8 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.25■□□□□ 0.67
Trbv2A0A0B4J1G8 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv2A0A0B4J1G8 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trbv2A0A0B4J1G8 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Trbv2A0A0B4J1G8 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Trbv2A0A0B4J1G8 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trbv2A0A0B4J1G8 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trbv2A0A0B4J1G8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trbv2A0A0B4J1G8 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trbv2A0A0B4J1G8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Trbv2A0A0B4J1G8 AC154454.1-201ENSMUST00000225253 216 ntBASIC19.24■□□□□ 0.67
Trbv2A0A0B4J1G8 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.24■□□□□ 0.67
Trbv2A0A0B4J1G8 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Trbv2A0A0B4J1G8 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.23■□□□□ 0.67
Trbv2A0A0B4J1G8 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv2A0A0B4J1G8 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv2A0A0B4J1G8 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv2A0A0B4J1G8 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv2A0A0B4J1G8 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Trbv2A0A0B4J1G8 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Trbv2A0A0B4J1G8 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trbv2A0A0B4J1G8 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms