Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv3A0A0A6YYE2 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv3A0A0A6YYE2 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC16.81■□□□□ 0.28
Trbv3A0A0A6YYE2 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv3A0A0A6YYE2 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv3A0A0A6YYE2 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trbv3A0A0A6YYE2 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trbv3A0A0A6YYE2 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.8■□□□□ 0.28
Trbv3A0A0A6YYE2 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv3A0A0A6YYE2 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC16.8■□□□□ 0.28
Trbv3A0A0A6YYE2 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Trbv3A0A0A6YYE2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv3A0A0A6YYE2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trbv3A0A0A6YYE2 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC16.8■□□□□ 0.28
Trbv3A0A0A6YYE2 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
Trbv3A0A0A6YYE2 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trbv3A0A0A6YYE2 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv3A0A0A6YYE2 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv3A0A0A6YYE2 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv3A0A0A6YYE2 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv3A0A0A6YYE2 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv3A0A0A6YYE2 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv3A0A0A6YYE2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv3A0A0A6YYE2 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trbv3A0A0A6YYE2 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Trbv3A0A0A6YYE2 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trbv3A0A0A6YYE2 AC124392.1-201ENSMUST00000225172 5324 ntBASIC16.77■□□□□ 0.28
Trbv3A0A0A6YYE2 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trbv3A0A0A6YYE2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trbv3A0A0A6YYE2 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trbv3A0A0A6YYE2 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trbv3A0A0A6YYE2 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC16.76■□□□□ 0.27
Trbv3A0A0A6YYE2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv3A0A0A6YYE2 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv3A0A0A6YYE2 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv3A0A0A6YYE2 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv3A0A0A6YYE2 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trbv3A0A0A6YYE2 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv3A0A0A6YYE2 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
Trbv3A0A0A6YYE2 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv3A0A0A6YYE2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trbv3A0A0A6YYE2 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Trbv3A0A0A6YYE2 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv3A0A0A6YYE2 Gm42418-201ENSMUST00000182010 1831 ntBASIC16.73■□□□□ 0.27
Trbv3A0A0A6YYE2 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv3A0A0A6YYE2 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC16.73■□□□□ 0.27
Trbv3A0A0A6YYE2 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv3A0A0A6YYE2 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trbv3A0A0A6YYE2 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trbv3A0A0A6YYE2 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv3A0A0A6YYE2 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv3A0A0A6YYE2 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trbv3A0A0A6YYE2 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv3A0A0A6YYE2 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv3A0A0A6YYE2 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv3A0A0A6YYE2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv3A0A0A6YYE2 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv3A0A0A6YYE2 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv3A0A0A6YYE2 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trbv3A0A0A6YYE2 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv3A0A0A6YYE2 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv3A0A0A6YYE2 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv3A0A0A6YYE2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Trbv3A0A0A6YYE2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv3A0A0A6YYE2 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv3A0A0A6YYE2 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Trbv3A0A0A6YYE2 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv3A0A0A6YYE2 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv3A0A0A6YYE2 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trbv3A0A0A6YYE2 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv3A0A0A6YYE2 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv3A0A0A6YYE2 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trbv3A0A0A6YYE2 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv3A0A0A6YYE2 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv3A0A0A6YYE2 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv3A0A0A6YYE2 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC16.69■□□□□ 0.26
Trbv3A0A0A6YYE2 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv3A0A0A6YYE2 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv3A0A0A6YYE2 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv3A0A0A6YYE2 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv3A0A0A6YYE2 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv3A0A0A6YYE2 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv3A0A0A6YYE2 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv3A0A0A6YYE2 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv3A0A0A6YYE2 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Trbv3A0A0A6YYE2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trbv3A0A0A6YYE2 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv3A0A0A6YYE2 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Trbv3A0A0A6YYE2 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv3A0A0A6YYE2 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv3A0A0A6YYE2 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv3A0A0A6YYE2 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv3A0A0A6YYE2 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Trbv3A0A0A6YYE2 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trbv3A0A0A6YYE2 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC16.67■□□□□ 0.26
Trbv3A0A0A6YYE2 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trbv3A0A0A6YYE2 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC16.67■□□□□ 0.26
Trbv3A0A0A6YYE2 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Trbv3A0A0A6YYE2 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
Trbv3A0A0A6YYE2 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 106.7 ms