Protein–RNA interactions for Protein: A0A0A6YX19

Ighv6-4, Immunoglobulin heavy variable V6-4 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv6-4A0A0A6YX19 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv6-4A0A0A6YX19 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Ighv6-4A0A0A6YX19 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.28■□□□□ 0.36
Ighv6-4A0A0A6YX19 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv6-4A0A0A6YX19 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv6-4A0A0A6YX19 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv6-4A0A0A6YX19 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Ighv6-4A0A0A6YX19 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Ighv6-4A0A0A6YX19 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv6-4A0A0A6YX19 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv6-4A0A0A6YX19 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Ighv6-4A0A0A6YX19 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ighv6-4A0A0A6YX19 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ighv6-4A0A0A6YX19 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ighv6-4A0A0A6YX19 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv6-4A0A0A6YX19 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv6-4A0A0A6YX19 Gm30023-201ENSMUST00000197970 889 ntBASIC17.26■□□□□ 0.35
Ighv6-4A0A0A6YX19 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.26■□□□□ 0.35
Ighv6-4A0A0A6YX19 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv6-4A0A0A6YX19 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.26■□□□□ 0.35
Ighv6-4A0A0A6YX19 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Ighv6-4A0A0A6YX19 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ighv6-4A0A0A6YX19 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv6-4A0A0A6YX19 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Ighv6-4A0A0A6YX19 Gm4419-202ENSMUST00000226239 1431 ntBASIC17.25■□□□□ 0.35
Ighv6-4A0A0A6YX19 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv6-4A0A0A6YX19 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Ighv6-4A0A0A6YX19 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ighv6-4A0A0A6YX19 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv6-4A0A0A6YX19 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv6-4A0A0A6YX19 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Ighv6-4A0A0A6YX19 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv6-4A0A0A6YX19 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv6-4A0A0A6YX19 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv6-4A0A0A6YX19 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv6-4A0A0A6YX19 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv6-4A0A0A6YX19 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ighv6-4A0A0A6YX19 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv6-4A0A0A6YX19 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv6-4A0A0A6YX19 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC17.23■□□□□ 0.35
Ighv6-4A0A0A6YX19 Zfp131-205ENSMUST00000223812 663 ntBASIC17.23■□□□□ 0.35
Ighv6-4A0A0A6YX19 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Ighv6-4A0A0A6YX19 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Ighv6-4A0A0A6YX19 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ighv6-4A0A0A6YX19 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv6-4A0A0A6YX19 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv6-4A0A0A6YX19 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv6-4A0A0A6YX19 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv6-4A0A0A6YX19 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv6-4A0A0A6YX19 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv6-4A0A0A6YX19 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Ighv6-4A0A0A6YX19 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ighv6-4A0A0A6YX19 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC17.21■□□□□ 0.35
Ighv6-4A0A0A6YX19 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv6-4A0A0A6YX19 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv6-4A0A0A6YX19 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv6-4A0A0A6YX19 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.21■□□□□ 0.35
Ighv6-4A0A0A6YX19 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ighv6-4A0A0A6YX19 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Ighv6-4A0A0A6YX19 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv6-4A0A0A6YX19 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Ighv6-4A0A0A6YX19 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Ighv6-4A0A0A6YX19 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv6-4A0A0A6YX19 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
Ighv6-4A0A0A6YX19 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv6-4A0A0A6YX19 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ighv6-4A0A0A6YX19 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv6-4A0A0A6YX19 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv6-4A0A0A6YX19 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv6-4A0A0A6YX19 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ighv6-4A0A0A6YX19 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv6-4A0A0A6YX19 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Ighv6-4A0A0A6YX19 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Ighv6-4A0A0A6YX19 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC17.18■□□□□ 0.34
Ighv6-4A0A0A6YX19 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Ighv6-4A0A0A6YX19 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv6-4A0A0A6YX19 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ighv6-4A0A0A6YX19 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv6-4A0A0A6YX19 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv6-4A0A0A6YX19 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Ighv6-4A0A0A6YX19 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Ighv6-4A0A0A6YX19 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv6-4A0A0A6YX19 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv6-4A0A0A6YX19 Gm43863-201ENSMUST00000203822 1192 ntBASIC17.17■□□□□ 0.34
Ighv6-4A0A0A6YX19 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv6-4A0A0A6YX19 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ighv6-4A0A0A6YX19 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.16■□□□□ 0.34
Ighv6-4A0A0A6YX19 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv6-4A0A0A6YX19 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Ighv6-4A0A0A6YX19 Tdp2-203ENSMUST00000223804 1136 ntBASIC17.16■□□□□ 0.34
Ighv6-4A0A0A6YX19 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv6-4A0A0A6YX19 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
Ighv6-4A0A0A6YX19 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
Ighv6-4A0A0A6YX19 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.16■□□□□ 0.34
Ighv6-4A0A0A6YX19 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv6-4A0A0A6YX19 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ighv6-4A0A0A6YX19 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.16■□□□□ 0.34
Ighv6-4A0A0A6YX19 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv6-4A0A0A6YX19 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Ighv6-4A0A0A6YX19 AC157572.2-201ENSMUST00000226970 908 ntBASIC17.15■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms