Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trav17A0A075B655 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trav17A0A075B655 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.24■□□□□ 0.35
Trav17A0A075B655 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Trav17A0A075B655 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trav17A0A075B655 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.24■□□□□ 0.35
Trav17A0A075B655 Gm22567-201ENSMUST00000175542 342 ntBASIC17.24■□□□□ 0.35
Trav17A0A075B655 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav17A0A075B655 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trav17A0A075B655 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav17A0A075B655 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav17A0A075B655 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav17A0A075B655 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trav17A0A075B655 AC131739.1-201ENSMUST00000221692 1245 ntBASIC17.23■□□□□ 0.35
Trav17A0A075B655 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav17A0A075B655 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav17A0A075B655 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.23■□□□□ 0.35
Trav17A0A075B655 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.23■□□□□ 0.35
Trav17A0A075B655 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav17A0A075B655 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav17A0A075B655 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Trav17A0A075B655 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Trav17A0A075B655 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trav17A0A075B655 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav17A0A075B655 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav17A0A075B655 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Trav17A0A075B655 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Trav17A0A075B655 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trav17A0A075B655 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Trav17A0A075B655 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.22■□□□□ 0.35
Trav17A0A075B655 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav17A0A075B655 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav17A0A075B655 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav17A0A075B655 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav17A0A075B655 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Trav17A0A075B655 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav17A0A075B655 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav17A0A075B655 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trav17A0A075B655 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Trav17A0A075B655 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Trav17A0A075B655 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Trav17A0A075B655 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav17A0A075B655 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav17A0A075B655 Gm6821-201ENSMUST00000107540 542 ntBASIC17.2■□□□□ 0.34
Trav17A0A075B655 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav17A0A075B655 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav17A0A075B655 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC17.2■□□□□ 0.34
Trav17A0A075B655 Gm9939-201ENSMUST00000067161 1154 ntBASIC17.2■□□□□ 0.34
Trav17A0A075B655 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Trav17A0A075B655 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav17A0A075B655 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav17A0A075B655 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav17A0A075B655 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Trav17A0A075B655 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Trav17A0A075B655 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.19■□□□□ 0.34
Trav17A0A075B655 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.19■□□□□ 0.34
Trav17A0A075B655 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.19■□□□□ 0.34
Trav17A0A075B655 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.19■□□□□ 0.34
Trav17A0A075B655 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav17A0A075B655 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav17A0A075B655 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav17A0A075B655 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Trav17A0A075B655 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav17A0A075B655 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav17A0A075B655 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav17A0A075B655 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Trav17A0A075B655 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav17A0A075B655 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Trav17A0A075B655 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav17A0A075B655 Gm4799-201ENSMUST00000095396 657 ntBASIC17.18■□□□□ 0.34
Trav17A0A075B655 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.18■□□□□ 0.34
Trav17A0A075B655 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav17A0A075B655 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Trav17A0A075B655 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav17A0A075B655 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav17A0A075B655 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav17A0A075B655 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Trav17A0A075B655 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav17A0A075B655 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav17A0A075B655 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav17A0A075B655 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav17A0A075B655 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
Trav17A0A075B655 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Trav17A0A075B655 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trav17A0A075B655 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav17A0A075B655 Gm20634-201ENSMUST00000090779 2956 ntBASIC17.16■□□□□ 0.34
Trav17A0A075B655 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav17A0A075B655 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trav17A0A075B655 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav17A0A075B655 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.15■□□□□ 0.34
Trav17A0A075B655 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.15■□□□□ 0.34
Trav17A0A075B655 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav17A0A075B655 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC17.15■□□□□ 0.34
Trav17A0A075B655 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav17A0A075B655 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav17A0A075B655 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav17A0A075B655 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.34
Trav17A0A075B655 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav17A0A075B655 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.14■□□□□ 0.33
Trav17A0A075B655 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms