Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trav8n-2A0A075B633 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trav8n-2A0A075B633 Gm43034-201ENSMUST00000198678 1364 ntBASIC20.12■□□□□ 0.81
Trav8n-2A0A075B633 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Trav8n-2A0A075B633 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trav8n-2A0A075B633 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Trav8n-2A0A075B633 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Trav8n-2A0A075B633 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav8n-2A0A075B633 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav8n-2A0A075B633 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav8n-2A0A075B633 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trav8n-2A0A075B633 Gm9847-201ENSMUST00000052528 599 ntBASIC20.11■□□□□ 0.81
Trav8n-2A0A075B633 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.11■□□□□ 0.81
Trav8n-2A0A075B633 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav8n-2A0A075B633 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trav8n-2A0A075B633 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trav8n-2A0A075B633 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.1■□□□□ 0.81
Trav8n-2A0A075B633 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trav8n-2A0A075B633 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.09■□□□□ 0.81
Trav8n-2A0A075B633 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav8n-2A0A075B633 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.09■□□□□ 0.81
Trav8n-2A0A075B633 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav8n-2A0A075B633 Gm22238-201ENSMUST00000175222 88 ntBASIC20.09■□□□□ 0.81
Trav8n-2A0A075B633 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.09■□□□□ 0.81
Trav8n-2A0A075B633 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav8n-2A0A075B633 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trav8n-2A0A075B633 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Trav8n-2A0A075B633 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trav8n-2A0A075B633 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trav8n-2A0A075B633 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trav8n-2A0A075B633 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trav8n-2A0A075B633 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trav8n-2A0A075B633 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trav8n-2A0A075B633 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.07■□□□□ 0.8
Trav8n-2A0A075B633 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.07■□□□□ 0.8
Trav8n-2A0A075B633 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.07■□□□□ 0.8
Trav8n-2A0A075B633 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.07■□□□□ 0.8
Trav8n-2A0A075B633 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Trav8n-2A0A075B633 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
Trav8n-2A0A075B633 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trav8n-2A0A075B633 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.06■□□□□ 0.8
Trav8n-2A0A075B633 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.06■□□□□ 0.8
Trav8n-2A0A075B633 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Trav8n-2A0A075B633 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trav8n-2A0A075B633 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
Trav8n-2A0A075B633 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trav8n-2A0A075B633 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Trav8n-2A0A075B633 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trav8n-2A0A075B633 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.06■□□□□ 0.8
Trav8n-2A0A075B633 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Trav8n-2A0A075B633 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav8n-2A0A075B633 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trav8n-2A0A075B633 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.05■□□□□ 0.8
Trav8n-2A0A075B633 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav8n-2A0A075B633 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Trav8n-2A0A075B633 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav8n-2A0A075B633 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav8n-2A0A075B633 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav8n-2A0A075B633 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav8n-2A0A075B633 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav8n-2A0A075B633 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav8n-2A0A075B633 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav8n-2A0A075B633 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav8n-2A0A075B633 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Trav8n-2A0A075B633 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav8n-2A0A075B633 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.03■□□□□ 0.8
Trav8n-2A0A075B633 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav8n-2A0A075B633 Gm10399-202ENSMUST00000202768 748 ntBASIC20.03■□□□□ 0.8
Trav8n-2A0A075B633 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav8n-2A0A075B633 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav8n-2A0A075B633 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC20.03■□□□□ 0.8
Trav8n-2A0A075B633 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav8n-2A0A075B633 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Trav8n-2A0A075B633 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.02■□□□□ 0.8
Trav8n-2A0A075B633 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.02■□□□□ 0.8
Trav8n-2A0A075B633 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Trav8n-2A0A075B633 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trav8n-2A0A075B633 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Trav8n-2A0A075B633 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trav8n-2A0A075B633 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trav8n-2A0A075B633 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Trav8n-2A0A075B633 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trav8n-2A0A075B633 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.01■□□□□ 0.79
Trav8n-2A0A075B633 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.01■□□□□ 0.79
Trav8n-2A0A075B633 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Trav8n-2A0A075B633 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trav8n-2A0A075B633 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20■□□□□ 0.79
Trav8n-2A0A075B633 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trav8n-2A0A075B633 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Trav8n-2A0A075B633 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Trav8n-2A0A075B633 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trav8n-2A0A075B633 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Trav8n-2A0A075B633 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav8n-2A0A075B633 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trav8n-2A0A075B633 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav8n-2A0A075B633 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav8n-2A0A075B633 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.98■□□□□ 0.79
Trav8n-2A0A075B633 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav8n-2A0A075B633 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trav8n-2A0A075B633 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms