Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
H2afb3S4R1G7 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.62■□□□□ 0.73
H2afb3S4R1G7 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
H2afb3S4R1G7 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.62■□□□□ 0.73
H2afb3S4R1G7 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
H2afb3S4R1G7 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
H2afb3S4R1G7 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
H2afb3S4R1G7 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
H2afb3S4R1G7 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
H2afb3S4R1G7 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
H2afb3S4R1G7 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
H2afb3S4R1G7 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
H2afb3S4R1G7 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
H2afb3S4R1G7 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
H2afb3S4R1G7 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
H2afb3S4R1G7 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
H2afb3S4R1G7 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
H2afb3S4R1G7 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
H2afb3S4R1G7 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
H2afb3S4R1G7 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
H2afb3S4R1G7 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.6■□□□□ 0.73
H2afb3S4R1G7 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
H2afb3S4R1G7 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
H2afb3S4R1G7 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
H2afb3S4R1G7 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
H2afb3S4R1G7 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
H2afb3S4R1G7 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.6■□□□□ 0.73
H2afb3S4R1G7 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
H2afb3S4R1G7 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
H2afb3S4R1G7 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
H2afb3S4R1G7 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.59■□□□□ 0.73
H2afb3S4R1G7 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
H2afb3S4R1G7 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
H2afb3S4R1G7 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.59■□□□□ 0.73
H2afb3S4R1G7 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
H2afb3S4R1G7 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
H2afb3S4R1G7 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
H2afb3S4R1G7 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
H2afb3S4R1G7 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
H2afb3S4R1G7 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
H2afb3S4R1G7 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.58■□□□□ 0.73
H2afb3S4R1G7 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
H2afb3S4R1G7 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.58■□□□□ 0.72
H2afb3S4R1G7 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
H2afb3S4R1G7 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
H2afb3S4R1G7 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
H2afb3S4R1G7 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
H2afb3S4R1G7 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
H2afb3S4R1G7 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
H2afb3S4R1G7 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
H2afb3S4R1G7 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
H2afb3S4R1G7 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
H2afb3S4R1G7 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
H2afb3S4R1G7 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
H2afb3S4R1G7 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
H2afb3S4R1G7 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
H2afb3S4R1G7 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
H2afb3S4R1G7 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
H2afb3S4R1G7 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
H2afb3S4R1G7 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
H2afb3S4R1G7 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
H2afb3S4R1G7 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.54■□□□□ 0.72
H2afb3S4R1G7 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.54■□□□□ 0.72
H2afb3S4R1G7 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
H2afb3S4R1G7 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
H2afb3S4R1G7 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
H2afb3S4R1G7 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
H2afb3S4R1G7 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
H2afb3S4R1G7 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
H2afb3S4R1G7 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
H2afb3S4R1G7 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
H2afb3S4R1G7 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
H2afb3S4R1G7 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
H2afb3S4R1G7 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC19.52■□□□□ 0.72
H2afb3S4R1G7 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
H2afb3S4R1G7 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
H2afb3S4R1G7 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
H2afb3S4R1G7 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
H2afb3S4R1G7 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
H2afb3S4R1G7 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.51■□□□□ 0.71
H2afb3S4R1G7 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
H2afb3S4R1G7 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
H2afb3S4R1G7 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
H2afb3S4R1G7 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
H2afb3S4R1G7 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
H2afb3S4R1G7 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
H2afb3S4R1G7 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
H2afb3S4R1G7 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
H2afb3S4R1G7 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
H2afb3S4R1G7 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
H2afb3S4R1G7 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
H2afb3S4R1G7 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
H2afb3S4R1G7 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
H2afb3S4R1G7 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
H2afb3S4R1G7 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC19.49■□□□□ 0.71
H2afb3S4R1G7 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
H2afb3S4R1G7 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
H2afb3S4R1G7 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
H2afb3S4R1G7 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
H2afb3S4R1G7 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms