Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
H2afb1S4R1E0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
H2afb1S4R1E0 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.76■□□□□ 0.75
H2afb1S4R1E0 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
H2afb1S4R1E0 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.76■□□□□ 0.75
H2afb1S4R1E0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
H2afb1S4R1E0 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
H2afb1S4R1E0 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
H2afb1S4R1E0 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
H2afb1S4R1E0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
H2afb1S4R1E0 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
H2afb1S4R1E0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
H2afb1S4R1E0 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.74■□□□□ 0.75
H2afb1S4R1E0 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.73■□□□□ 0.75
H2afb1S4R1E0 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
H2afb1S4R1E0 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
H2afb1S4R1E0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
H2afb1S4R1E0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.73■□□□□ 0.75
H2afb1S4R1E0 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
H2afb1S4R1E0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
H2afb1S4R1E0 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.72■□□□□ 0.75
H2afb1S4R1E0 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
H2afb1S4R1E0 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
H2afb1S4R1E0 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
H2afb1S4R1E0 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
H2afb1S4R1E0 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
H2afb1S4R1E0 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
H2afb1S4R1E0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
H2afb1S4R1E0 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
H2afb1S4R1E0 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.71■□□□□ 0.75
H2afb1S4R1E0 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
H2afb1S4R1E0 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
H2afb1S4R1E0 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
H2afb1S4R1E0 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.7■□□□□ 0.74
H2afb1S4R1E0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
H2afb1S4R1E0 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
H2afb1S4R1E0 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
H2afb1S4R1E0 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
H2afb1S4R1E0 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
H2afb1S4R1E0 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
H2afb1S4R1E0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
H2afb1S4R1E0 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
H2afb1S4R1E0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
H2afb1S4R1E0 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
H2afb1S4R1E0 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
H2afb1S4R1E0 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
H2afb1S4R1E0 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.68■□□□□ 0.74
H2afb1S4R1E0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.68■□□□□ 0.74
H2afb1S4R1E0 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
H2afb1S4R1E0 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
H2afb1S4R1E0 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.68■□□□□ 0.74
H2afb1S4R1E0 Terc-201ENSMUST00000082862 423 ntBASIC19.68■□□□□ 0.74
H2afb1S4R1E0 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
H2afb1S4R1E0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
H2afb1S4R1E0 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
H2afb1S4R1E0 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
H2afb1S4R1E0 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
H2afb1S4R1E0 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
H2afb1S4R1E0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.68■□□□□ 0.74
H2afb1S4R1E0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
H2afb1S4R1E0 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
H2afb1S4R1E0 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
H2afb1S4R1E0 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
H2afb1S4R1E0 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.67■□□□□ 0.74
H2afb1S4R1E0 Gm45364-201ENSMUST00000210883 159 ntBASIC19.67■□□□□ 0.74
H2afb1S4R1E0 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.67■□□□□ 0.74
H2afb1S4R1E0 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
H2afb1S4R1E0 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
H2afb1S4R1E0 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.66■□□□□ 0.74
H2afb1S4R1E0 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
H2afb1S4R1E0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
H2afb1S4R1E0 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
H2afb1S4R1E0 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
H2afb1S4R1E0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
H2afb1S4R1E0 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
H2afb1S4R1E0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
H2afb1S4R1E0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
H2afb1S4R1E0 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
H2afb1S4R1E0 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
H2afb1S4R1E0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
H2afb1S4R1E0 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
H2afb1S4R1E0 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
H2afb1S4R1E0 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
H2afb1S4R1E0 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
H2afb1S4R1E0 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
H2afb1S4R1E0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
H2afb1S4R1E0 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.63■□□□□ 0.73
H2afb1S4R1E0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
H2afb1S4R1E0 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
H2afb1S4R1E0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
H2afb1S4R1E0 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
H2afb1S4R1E0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
H2afb1S4R1E0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.63■□□□□ 0.73
H2afb1S4R1E0 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
H2afb1S4R1E0 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
H2afb1S4R1E0 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.62■□□□□ 0.73
H2afb1S4R1E0 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
H2afb1S4R1E0 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.62■□□□□ 0.73
H2afb1S4R1E0 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
H2afb1S4R1E0 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms