Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Lhx9Q9WUH2 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lhx9Q9WUH2 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lhx9Q9WUH2 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lhx9Q9WUH2 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.97■□□□□ 0.95
Lhx9Q9WUH2 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.97■□□□□ 0.95
Lhx9Q9WUH2 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lhx9Q9WUH2 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lhx9Q9WUH2 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Lhx9Q9WUH2 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Lhx9Q9WUH2 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lhx9Q9WUH2 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Lhx9Q9WUH2 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
Lhx9Q9WUH2 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.96■□□□□ 0.95
Lhx9Q9WUH2 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lhx9Q9WUH2 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Lhx9Q9WUH2 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lhx9Q9WUH2 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lhx9Q9WUH2 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lhx9Q9WUH2 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.95■□□□□ 0.94
Lhx9Q9WUH2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Lhx9Q9WUH2 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lhx9Q9WUH2 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lhx9Q9WUH2 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Lhx9Q9WUH2 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lhx9Q9WUH2 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lhx9Q9WUH2 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lhx9Q9WUH2 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lhx9Q9WUH2 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.94■□□□□ 0.94
Lhx9Q9WUH2 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Lhx9Q9WUH2 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Lhx9Q9WUH2 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Lhx9Q9WUH2 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Lhx9Q9WUH2 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Lhx9Q9WUH2 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Lhx9Q9WUH2 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Lhx9Q9WUH2 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Lhx9Q9WUH2 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Lhx9Q9WUH2 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Lhx9Q9WUH2 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Lhx9Q9WUH2 Gm15546-201ENSMUST00000122095 826 ntBASIC20.92■□□□□ 0.94
Lhx9Q9WUH2 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lhx9Q9WUH2 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Lhx9Q9WUH2 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lhx9Q9WUH2 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Lhx9Q9WUH2 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Lhx9Q9WUH2 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Lhx9Q9WUH2 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lhx9Q9WUH2 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lhx9Q9WUH2 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lhx9Q9WUH2 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lhx9Q9WUH2 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Lhx9Q9WUH2 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Lhx9Q9WUH2 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Lhx9Q9WUH2 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.89■□□□□ 0.94
Lhx9Q9WUH2 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Lhx9Q9WUH2 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Lhx9Q9WUH2 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Lhx9Q9WUH2 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.89■□□□□ 0.93
Lhx9Q9WUH2 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Lhx9Q9WUH2 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lhx9Q9WUH2 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Lhx9Q9WUH2 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lhx9Q9WUH2 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Lhx9Q9WUH2 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.88■□□□□ 0.93
Lhx9Q9WUH2 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.88■□□□□ 0.93
Lhx9Q9WUH2 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Lhx9Q9WUH2 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lhx9Q9WUH2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.87■□□□□ 0.93
Lhx9Q9WUH2 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.87■□□□□ 0.93
Lhx9Q9WUH2 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Lhx9Q9WUH2 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Lhx9Q9WUH2 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.86■□□□□ 0.93
Lhx9Q9WUH2 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lhx9Q9WUH2 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lhx9Q9WUH2 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Lhx9Q9WUH2 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Lhx9Q9WUH2 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.86■□□□□ 0.93
Lhx9Q9WUH2 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Lhx9Q9WUH2 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Lhx9Q9WUH2 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Lhx9Q9WUH2 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Lhx9Q9WUH2 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Lhx9Q9WUH2 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lhx9Q9WUH2 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lhx9Q9WUH2 Gm43566-201ENSMUST00000196851 808 ntBASIC20.85■□□□□ 0.93
Lhx9Q9WUH2 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Lhx9Q9WUH2 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lhx9Q9WUH2 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.84■□□□□ 0.93
Lhx9Q9WUH2 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lhx9Q9WUH2 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.84■□□□□ 0.93
Lhx9Q9WUH2 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lhx9Q9WUH2 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Lhx9Q9WUH2 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Lhx9Q9WUH2 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lhx9Q9WUH2 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lhx9Q9WUH2 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
Lhx9Q9WUH2 Gm13238-201ENSMUST00000117655 780 ntBASIC20.83■□□□□ 0.93
Lhx9Q9WUH2 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Lhx9Q9WUH2 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms