Protein–RNA interactions for Protein: Q9JHS4

Clpx, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, mousemouse

Known RBP Predictions only

Length 634 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpxQ9JHS4 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ClpxQ9JHS4 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.9■□□□□ 0.78
ClpxQ9JHS4 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ClpxQ9JHS4 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.89■□□□□ 0.77
ClpxQ9JHS4 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.88■□□□□ 0.77
ClpxQ9JHS4 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ClpxQ9JHS4 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ClpxQ9JHS4 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.88■□□□□ 0.77
ClpxQ9JHS4 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ClpxQ9JHS4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ClpxQ9JHS4 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
ClpxQ9JHS4 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ClpxQ9JHS4 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ClpxQ9JHS4 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ClpxQ9JHS4 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
ClpxQ9JHS4 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ClpxQ9JHS4 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ClpxQ9JHS4 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
ClpxQ9JHS4 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ClpxQ9JHS4 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
ClpxQ9JHS4 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ClpxQ9JHS4 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
ClpxQ9JHS4 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ClpxQ9JHS4 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
ClpxQ9JHS4 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ClpxQ9JHS4 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ClpxQ9JHS4 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ClpxQ9JHS4 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ClpxQ9JHS4 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
ClpxQ9JHS4 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.83■□□□□ 0.76
ClpxQ9JHS4 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ClpxQ9JHS4 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ClpxQ9JHS4 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ClpxQ9JHS4 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ClpxQ9JHS4 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ClpxQ9JHS4 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ClpxQ9JHS4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ClpxQ9JHS4 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ClpxQ9JHS4 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ClpxQ9JHS4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
ClpxQ9JHS4 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
ClpxQ9JHS4 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ClpxQ9JHS4 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ClpxQ9JHS4 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
ClpxQ9JHS4 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
ClpxQ9JHS4 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ClpxQ9JHS4 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ClpxQ9JHS4 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.8■□□□□ 0.76
ClpxQ9JHS4 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC19.8■□□□□ 0.76
ClpxQ9JHS4 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ClpxQ9JHS4 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
ClpxQ9JHS4 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ClpxQ9JHS4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ClpxQ9JHS4 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ClpxQ9JHS4 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.79■□□□□ 0.76
ClpxQ9JHS4 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.79■□□□□ 0.76
ClpxQ9JHS4 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
ClpxQ9JHS4 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ClpxQ9JHS4 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
ClpxQ9JHS4 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
ClpxQ9JHS4 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.78■□□□□ 0.76
ClpxQ9JHS4 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ClpxQ9JHS4 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ClpxQ9JHS4 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ClpxQ9JHS4 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ClpxQ9JHS4 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
ClpxQ9JHS4 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ClpxQ9JHS4 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ClpxQ9JHS4 Gm37136-201ENSMUST00000194368 194 ntBASIC19.77■□□□□ 0.76
ClpxQ9JHS4 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ClpxQ9JHS4 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
ClpxQ9JHS4 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ClpxQ9JHS4 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ClpxQ9JHS4 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ClpxQ9JHS4 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ClpxQ9JHS4 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ClpxQ9JHS4 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
ClpxQ9JHS4 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
ClpxQ9JHS4 AC167019.3-201ENSMUST00000228225 1266 ntBASIC19.76■□□□□ 0.75
ClpxQ9JHS4 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ClpxQ9JHS4 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
ClpxQ9JHS4 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ClpxQ9JHS4 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.75■□□□□ 0.75
ClpxQ9JHS4 Gm4799-201ENSMUST00000095396 657 ntBASIC19.75■□□□□ 0.75
ClpxQ9JHS4 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ClpxQ9JHS4 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC19.75■□□□□ 0.75
ClpxQ9JHS4 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ClpxQ9JHS4 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ClpxQ9JHS4 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ClpxQ9JHS4 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ClpxQ9JHS4 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ClpxQ9JHS4 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ClpxQ9JHS4 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ClpxQ9JHS4 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.74■□□□□ 0.75
ClpxQ9JHS4 Gm6311-201ENSMUST00000073790 878 ntBASIC19.74■□□□□ 0.75
ClpxQ9JHS4 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ClpxQ9JHS4 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
ClpxQ9JHS4 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.73■□□□□ 0.75
ClpxQ9JHS4 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ClpxQ9JHS4 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms