Protein–RNA interactions for Protein: Q9EQR5

Lime1, Lck-interacting transmembrane adapter 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lime1Q9EQR5 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lime1Q9EQR5 Terc-201ENSMUST00000082862 423 ntBASIC19.22■□□□□ 0.67
Lime1Q9EQR5 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Lime1Q9EQR5 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Lime1Q9EQR5 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lime1Q9EQR5 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.21■□□□□ 0.67
Lime1Q9EQR5 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Lime1Q9EQR5 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.2■□□□□ 0.66
Lime1Q9EQR5 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lime1Q9EQR5 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Lime1Q9EQR5 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lime1Q9EQR5 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lime1Q9EQR5 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.19■□□□□ 0.66
Lime1Q9EQR5 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lime1Q9EQR5 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Lime1Q9EQR5 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lime1Q9EQR5 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.19■□□□□ 0.66
Lime1Q9EQR5 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lime1Q9EQR5 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Lime1Q9EQR5 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Lime1Q9EQR5 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Lime1Q9EQR5 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lime1Q9EQR5 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lime1Q9EQR5 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Lime1Q9EQR5 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Lime1Q9EQR5 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.17■□□□□ 0.66
Lime1Q9EQR5 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lime1Q9EQR5 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.17■□□□□ 0.66
Lime1Q9EQR5 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lime1Q9EQR5 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lime1Q9EQR5 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lime1Q9EQR5 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Lime1Q9EQR5 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lime1Q9EQR5 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lime1Q9EQR5 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.16■□□□□ 0.66
Lime1Q9EQR5 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
Lime1Q9EQR5 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Lime1Q9EQR5 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lime1Q9EQR5 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lime1Q9EQR5 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.15■□□□□ 0.66
Lime1Q9EQR5 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lime1Q9EQR5 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Lime1Q9EQR5 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Lime1Q9EQR5 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Lime1Q9EQR5 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.66
Lime1Q9EQR5 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Lime1Q9EQR5 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lime1Q9EQR5 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Lime1Q9EQR5 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lime1Q9EQR5 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lime1Q9EQR5 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lime1Q9EQR5 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lime1Q9EQR5 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Lime1Q9EQR5 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Lime1Q9EQR5 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Lime1Q9EQR5 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lime1Q9EQR5 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Lime1Q9EQR5 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lime1Q9EQR5 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Lime1Q9EQR5 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lime1Q9EQR5 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lime1Q9EQR5 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Lime1Q9EQR5 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Lime1Q9EQR5 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lime1Q9EQR5 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.11■□□□□ 0.65
Lime1Q9EQR5 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lime1Q9EQR5 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Lime1Q9EQR5 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.11■□□□□ 0.65
Lime1Q9EQR5 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lime1Q9EQR5 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Lime1Q9EQR5 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Lime1Q9EQR5 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.11■□□□□ 0.65
Lime1Q9EQR5 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Lime1Q9EQR5 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lime1Q9EQR5 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.11■□□□□ 0.65
Lime1Q9EQR5 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.1■□□□□ 0.65
Lime1Q9EQR5 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lime1Q9EQR5 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lime1Q9EQR5 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Lime1Q9EQR5 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lime1Q9EQR5 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lime1Q9EQR5 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lime1Q9EQR5 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Lime1Q9EQR5 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lime1Q9EQR5 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Lime1Q9EQR5 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.09■□□□□ 0.65
Lime1Q9EQR5 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lime1Q9EQR5 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lime1Q9EQR5 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lime1Q9EQR5 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.09■□□□□ 0.65
Lime1Q9EQR5 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
Lime1Q9EQR5 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lime1Q9EQR5 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Lime1Q9EQR5 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Lime1Q9EQR5 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Lime1Q9EQR5 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Lime1Q9EQR5 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.08■□□□□ 0.64
Lime1Q9EQR5 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.08■□□□□ 0.64
Lime1Q9EQR5 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Lime1Q9EQR5 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms