Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC22.99■■□□□ 1.27
Nkx2-4Q9EQM3 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Nkx2-4Q9EQM3 AC140930.3-201ENSMUST00000222935 274 ntBASIC22.99■■□□□ 1.27
Nkx2-4Q9EQM3 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Nkx2-4Q9EQM3 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Nkx2-4Q9EQM3 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Nkx2-4Q9EQM3 Gm40881-201ENSMUST00000223397 166 ntBASIC22.96■■□□□ 1.27
Nkx2-4Q9EQM3 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Nkx2-4Q9EQM3 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Nkx2-4Q9EQM3 Gm7199-201ENSMUST00000118327 1485 ntBASIC22.95■■□□□ 1.26
Nkx2-4Q9EQM3 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Nkx2-4Q9EQM3 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC22.95■■□□□ 1.26
Nkx2-4Q9EQM3 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Nkx2-4Q9EQM3 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC22.95■■□□□ 1.26
Nkx2-4Q9EQM3 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.26
Nkx2-4Q9EQM3 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
Nkx2-4Q9EQM3 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Nkx2-4Q9EQM3 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC22.93■■□□□ 1.26
Nkx2-4Q9EQM3 Amer2-203ENSMUST00000225247 2662 ntBASIC22.93■■□□□ 1.26
Nkx2-4Q9EQM3 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC22.93■■□□□ 1.26
Nkx2-4Q9EQM3 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC22.93■■□□□ 1.26
Nkx2-4Q9EQM3 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC22.93■■□□□ 1.26
Nkx2-4Q9EQM3 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Nkx2-4Q9EQM3 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC22.93■■□□□ 1.26
Nkx2-4Q9EQM3 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC22.92■■□□□ 1.26
Nkx2-4Q9EQM3 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.91■■□□□ 1.26
Nkx2-4Q9EQM3 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
Nkx2-4Q9EQM3 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Nkx2-4Q9EQM3 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
Nkx2-4Q9EQM3 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Nkx2-4Q9EQM3 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Nkx2-4Q9EQM3 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Nkx2-4Q9EQM3 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Nkx2-4Q9EQM3 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Nkx2-4Q9EQM3 Gm12821-201ENSMUST00000120022 600 ntBASIC22.9■■□□□ 1.26
Nkx2-4Q9EQM3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC22.9■■□□□ 1.26
Nkx2-4Q9EQM3 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Nkx2-4Q9EQM3 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Nkx2-4Q9EQM3 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.9■■□□□ 1.26
Nkx2-4Q9EQM3 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
Nkx2-4Q9EQM3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Nkx2-4Q9EQM3 Gm28536-201ENSMUST00000190971 1317 ntBASIC22.89■■□□□ 1.26
Nkx2-4Q9EQM3 Gm12922-201ENSMUST00000120626 809 ntBASIC22.89■■□□□ 1.25
Nkx2-4Q9EQM3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC22.89■■□□□ 1.25
Nkx2-4Q9EQM3 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Nkx2-4Q9EQM3 Gm27454-201ENSMUST00000185090 204 ntBASIC22.89■■□□□ 1.25
Nkx2-4Q9EQM3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Nkx2-4Q9EQM3 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Nkx2-4Q9EQM3 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Nkx2-4Q9EQM3 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Nkx2-4Q9EQM3 Slc35b2-207ENSMUST00000226086 850 ntBASIC22.88■■□□□ 1.25
Nkx2-4Q9EQM3 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Nkx2-4Q9EQM3 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Nkx2-4Q9EQM3 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Nkx2-4Q9EQM3 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Nkx2-4Q9EQM3 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
Nkx2-4Q9EQM3 Gm45417-201ENSMUST00000209533 758 ntBASIC22.87■■□□□ 1.25
Nkx2-4Q9EQM3 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC22.87■■□□□ 1.25
Nkx2-4Q9EQM3 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Nkx2-4Q9EQM3 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC22.87■■□□□ 1.25
Nkx2-4Q9EQM3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Nkx2-4Q9EQM3 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
Nkx2-4Q9EQM3 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.86■■□□□ 1.25
Nkx2-4Q9EQM3 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Nkx2-4Q9EQM3 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC22.86■■□□□ 1.25
Nkx2-4Q9EQM3 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Nkx2-4Q9EQM3 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Nkx2-4Q9EQM3 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Nkx2-4Q9EQM3 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.85■■□□□ 1.25
Nkx2-4Q9EQM3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC22.85■■□□□ 1.25
Nkx2-4Q9EQM3 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC22.85■■□□□ 1.25
Nkx2-4Q9EQM3 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Nkx2-4Q9EQM3 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC22.85■■□□□ 1.25
Nkx2-4Q9EQM3 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC22.85■■□□□ 1.25
Nkx2-4Q9EQM3 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Nkx2-4Q9EQM3 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Nkx2-4Q9EQM3 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC22.84■■□□□ 1.25
Nkx2-4Q9EQM3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Nkx2-4Q9EQM3 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Nkx2-4Q9EQM3 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
Nkx2-4Q9EQM3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Nkx2-4Q9EQM3 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
Nkx2-4Q9EQM3 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Nkx2-4Q9EQM3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
Nkx2-4Q9EQM3 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Nkx2-4Q9EQM3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Nkx2-4Q9EQM3 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Nkx2-4Q9EQM3 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC22.82■■□□□ 1.24
Nkx2-4Q9EQM3 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Nkx2-4Q9EQM3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC22.81■■□□□ 1.24
Nkx2-4Q9EQM3 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Nkx2-4Q9EQM3 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
Nkx2-4Q9EQM3 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Nkx2-4Q9EQM3 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.8■■□□□ 1.24
Nkx2-4Q9EQM3 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Nkx2-4Q9EQM3 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Nkx2-4Q9EQM3 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Nkx2-4Q9EQM3 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC22.79■■□□□ 1.24
Nkx2-4Q9EQM3 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Nkx2-4Q9EQM3 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms