Protein–RNA interactions for Protein: Q9D9P8

Llcfc1, LLLL and CFNLAS motif-containing protein 1, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Llcfc1Q9D9P8 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Llcfc1Q9D9P8 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Llcfc1Q9D9P8 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Llcfc1Q9D9P8 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Llcfc1Q9D9P8 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Llcfc1Q9D9P8 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Llcfc1Q9D9P8 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Llcfc1Q9D9P8 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Llcfc1Q9D9P8 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.3
Llcfc1Q9D9P8 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC23.14■■□□□ 1.3
Llcfc1Q9D9P8 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Llcfc1Q9D9P8 Dmtn-209ENSMUST00000228295 2572 ntBASIC23.13■■□□□ 1.29
Llcfc1Q9D9P8 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Llcfc1Q9D9P8 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Llcfc1Q9D9P8 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Llcfc1Q9D9P8 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Llcfc1Q9D9P8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Llcfc1Q9D9P8 AC153524.1-201ENSMUST00000220436 1935 ntBASIC23.11■■□□□ 1.29
Llcfc1Q9D9P8 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Llcfc1Q9D9P8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Llcfc1Q9D9P8 Gm13042-201ENSMUST00000119244 1955 ntBASIC23.1■■□□□ 1.29
Llcfc1Q9D9P8 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Llcfc1Q9D9P8 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Llcfc1Q9D9P8 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Llcfc1Q9D9P8 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Llcfc1Q9D9P8 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Llcfc1Q9D9P8 Gm9910-201ENSMUST00000195385 1550 ntBASIC23.09■■□□□ 1.29
Llcfc1Q9D9P8 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Llcfc1Q9D9P8 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Llcfc1Q9D9P8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Llcfc1Q9D9P8 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Llcfc1Q9D9P8 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Llcfc1Q9D9P8 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC23.08■■□□□ 1.28
Llcfc1Q9D9P8 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Llcfc1Q9D9P8 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Llcfc1Q9D9P8 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Llcfc1Q9D9P8 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Llcfc1Q9D9P8 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.07■■□□□ 1.28
Llcfc1Q9D9P8 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Llcfc1Q9D9P8 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.07■■□□□ 1.28
Llcfc1Q9D9P8 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.07■■□□□ 1.28
Llcfc1Q9D9P8 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC23.07■■□□□ 1.28
Llcfc1Q9D9P8 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Llcfc1Q9D9P8 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Llcfc1Q9D9P8 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Llcfc1Q9D9P8 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Llcfc1Q9D9P8 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Llcfc1Q9D9P8 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Llcfc1Q9D9P8 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Llcfc1Q9D9P8 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Llcfc1Q9D9P8 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Llcfc1Q9D9P8 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Llcfc1Q9D9P8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
Llcfc1Q9D9P8 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
Llcfc1Q9D9P8 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Llcfc1Q9D9P8 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Llcfc1Q9D9P8 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Llcfc1Q9D9P8 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Llcfc1Q9D9P8 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Llcfc1Q9D9P8 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Llcfc1Q9D9P8 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC23.04■■□□□ 1.28
Llcfc1Q9D9P8 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Llcfc1Q9D9P8 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Llcfc1Q9D9P8 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
Llcfc1Q9D9P8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Llcfc1Q9D9P8 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Llcfc1Q9D9P8 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Llcfc1Q9D9P8 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Llcfc1Q9D9P8 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Llcfc1Q9D9P8 AC153962.1-201ENSMUST00000218530 1948 ntBASIC23.03■■□□□ 1.28
Llcfc1Q9D9P8 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Llcfc1Q9D9P8 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Llcfc1Q9D9P8 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Llcfc1Q9D9P8 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Llcfc1Q9D9P8 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Llcfc1Q9D9P8 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Llcfc1Q9D9P8 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.01■■□□□ 1.27
Llcfc1Q9D9P8 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Llcfc1Q9D9P8 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC23.01■■□□□ 1.27
Llcfc1Q9D9P8 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Llcfc1Q9D9P8 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Llcfc1Q9D9P8 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC23■■□□□ 1.27
Llcfc1Q9D9P8 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Llcfc1Q9D9P8 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC23■■□□□ 1.27
Llcfc1Q9D9P8 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC23■■□□□ 1.27
Llcfc1Q9D9P8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC23■■□□□ 1.27
Llcfc1Q9D9P8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
Llcfc1Q9D9P8 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Llcfc1Q9D9P8 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Llcfc1Q9D9P8 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Llcfc1Q9D9P8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC22.99■■□□□ 1.27
Llcfc1Q9D9P8 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Llcfc1Q9D9P8 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Llcfc1Q9D9P8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Llcfc1Q9D9P8 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Llcfc1Q9D9P8 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC22.98■■□□□ 1.27
Llcfc1Q9D9P8 AC115037.1-201ENSMUST00000223391 2173 ntBASIC22.98■■□□□ 1.27
Llcfc1Q9D9P8 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Llcfc1Q9D9P8 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Llcfc1Q9D9P8 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms