Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Shmt2Q9CZN7 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Shmt2Q9CZN7 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
Shmt2Q9CZN7 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.89■□□□□ 0.94
Shmt2Q9CZN7 Terc-201ENSMUST00000082862 423 ntBASIC20.89■□□□□ 0.93
Shmt2Q9CZN7 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Shmt2Q9CZN7 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Shmt2Q9CZN7 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Shmt2Q9CZN7 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Shmt2Q9CZN7 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Shmt2Q9CZN7 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Shmt2Q9CZN7 Gm11175-201ENSMUST00000116172 543 ntBASIC20.88■□□□□ 0.93
Shmt2Q9CZN7 Mir6538-201ENSMUST00000183713 110 ntBASIC20.88■□□□□ 0.93
Shmt2Q9CZN7 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Shmt2Q9CZN7 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Shmt2Q9CZN7 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Shmt2Q9CZN7 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Shmt2Q9CZN7 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Shmt2Q9CZN7 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Shmt2Q9CZN7 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.87■□□□□ 0.93
Shmt2Q9CZN7 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Shmt2Q9CZN7 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Shmt2Q9CZN7 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Shmt2Q9CZN7 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.85■□□□□ 0.93
Shmt2Q9CZN7 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.85■□□□□ 0.93
Shmt2Q9CZN7 Gm16437-201ENSMUST00000025669 507 ntBASIC20.85■□□□□ 0.93
Shmt2Q9CZN7 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.85■□□□□ 0.93
Shmt2Q9CZN7 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Shmt2Q9CZN7 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Shmt2Q9CZN7 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Shmt2Q9CZN7 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Shmt2Q9CZN7 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Shmt2Q9CZN7 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
Shmt2Q9CZN7 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.84■□□□□ 0.93
Shmt2Q9CZN7 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Shmt2Q9CZN7 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Shmt2Q9CZN7 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Shmt2Q9CZN7 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Shmt2Q9CZN7 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Shmt2Q9CZN7 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Shmt2Q9CZN7 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Shmt2Q9CZN7 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Shmt2Q9CZN7 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Shmt2Q9CZN7 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Shmt2Q9CZN7 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Shmt2Q9CZN7 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Shmt2Q9CZN7 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Shmt2Q9CZN7 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Shmt2Q9CZN7 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.81■□□□□ 0.92
Shmt2Q9CZN7 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Shmt2Q9CZN7 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Shmt2Q9CZN7 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
Shmt2Q9CZN7 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Shmt2Q9CZN7 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Shmt2Q9CZN7 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Shmt2Q9CZN7 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Shmt2Q9CZN7 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Shmt2Q9CZN7 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Shmt2Q9CZN7 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Shmt2Q9CZN7 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Shmt2Q9CZN7 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.8■□□□□ 0.92
Shmt2Q9CZN7 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Shmt2Q9CZN7 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Shmt2Q9CZN7 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Shmt2Q9CZN7 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shmt2Q9CZN7 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Shmt2Q9CZN7 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Shmt2Q9CZN7 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Shmt2Q9CZN7 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Shmt2Q9CZN7 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.77■□□□□ 0.91
Shmt2Q9CZN7 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.91
Shmt2Q9CZN7 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Shmt2Q9CZN7 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Shmt2Q9CZN7 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.76■□□□□ 0.91
Shmt2Q9CZN7 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.76■□□□□ 0.91
Shmt2Q9CZN7 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shmt2Q9CZN7 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shmt2Q9CZN7 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Shmt2Q9CZN7 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Shmt2Q9CZN7 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shmt2Q9CZN7 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shmt2Q9CZN7 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Shmt2Q9CZN7 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Shmt2Q9CZN7 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Shmt2Q9CZN7 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Shmt2Q9CZN7 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shmt2Q9CZN7 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Shmt2Q9CZN7 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.75■□□□□ 0.91
Shmt2Q9CZN7 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shmt2Q9CZN7 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shmt2Q9CZN7 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.74■□□□□ 0.91
Shmt2Q9CZN7 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.74■□□□□ 0.91
Shmt2Q9CZN7 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shmt2Q9CZN7 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Shmt2Q9CZN7 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shmt2Q9CZN7 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Shmt2Q9CZN7 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Shmt2Q9CZN7 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Shmt2Q9CZN7 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Shmt2Q9CZN7 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms