Protein–RNA interactions for Protein: Q9CQE0

Rnf138, E3 ubiquitin-protein ligase RNF138, mousemouse

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf138Q9CQE0 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rnf138Q9CQE0 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf138Q9CQE0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
Rnf138Q9CQE0 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf138Q9CQE0 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf138Q9CQE0 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf138Q9CQE0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf138Q9CQE0 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rnf138Q9CQE0 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Rnf138Q9CQE0 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.85■□□□□ 0.93
Rnf138Q9CQE0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.85■□□□□ 0.93
Rnf138Q9CQE0 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Rnf138Q9CQE0 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf138Q9CQE0 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.84■□□□□ 0.93
Rnf138Q9CQE0 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf138Q9CQE0 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf138Q9CQE0 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf138Q9CQE0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Rnf138Q9CQE0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Rnf138Q9CQE0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Rnf138Q9CQE0 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.83■□□□□ 0.93
Rnf138Q9CQE0 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Rnf138Q9CQE0 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rnf138Q9CQE0 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.83■□□□□ 0.92
Rnf138Q9CQE0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf138Q9CQE0 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf138Q9CQE0 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf138Q9CQE0 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf138Q9CQE0 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.82■□□□□ 0.92
Rnf138Q9CQE0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf138Q9CQE0 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rnf138Q9CQE0 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf138Q9CQE0 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.81■□□□□ 0.92
Rnf138Q9CQE0 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf138Q9CQE0 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Rnf138Q9CQE0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf138Q9CQE0 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.81■□□□□ 0.92
Rnf138Q9CQE0 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf138Q9CQE0 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf138Q9CQE0 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf138Q9CQE0 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rnf138Q9CQE0 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf138Q9CQE0 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf138Q9CQE0 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf138Q9CQE0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.8■□□□□ 0.92
Rnf138Q9CQE0 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.8■□□□□ 0.92
Rnf138Q9CQE0 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Rnf138Q9CQE0 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf138Q9CQE0 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
Rnf138Q9CQE0 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.79■□□□□ 0.92
Rnf138Q9CQE0 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Rnf138Q9CQE0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Rnf138Q9CQE0 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf138Q9CQE0 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC20.78■□□□□ 0.92
Rnf138Q9CQE0 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.78■□□□□ 0.92
Rnf138Q9CQE0 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Rnf138Q9CQE0 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Rnf138Q9CQE0 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.77■□□□□ 0.92
Rnf138Q9CQE0 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.77■□□□□ 0.92
Rnf138Q9CQE0 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rnf138Q9CQE0 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Rnf138Q9CQE0 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rnf138Q9CQE0 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rnf138Q9CQE0 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf138Q9CQE0 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf138Q9CQE0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf138Q9CQE0 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.76■□□□□ 0.91
Rnf138Q9CQE0 Gm22567-201ENSMUST00000175542 342 ntBASIC20.76■□□□□ 0.91
Rnf138Q9CQE0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf138Q9CQE0 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.76■□□□□ 0.91
Rnf138Q9CQE0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf138Q9CQE0 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rnf138Q9CQE0 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf138Q9CQE0 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf138Q9CQE0 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf138Q9CQE0 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf138Q9CQE0 Gm15546-201ENSMUST00000122095 826 ntBASIC20.75■□□□□ 0.91
Rnf138Q9CQE0 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf138Q9CQE0 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf138Q9CQE0 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Rnf138Q9CQE0 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
Rnf138Q9CQE0 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Rnf138Q9CQE0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Rnf138Q9CQE0 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf138Q9CQE0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf138Q9CQE0 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf138Q9CQE0 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Rnf138Q9CQE0 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf138Q9CQE0 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf138Q9CQE0 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf138Q9CQE0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf138Q9CQE0 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Rnf138Q9CQE0 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Rnf138Q9CQE0 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf138Q9CQE0 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf138Q9CQE0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.71■□□□□ 0.91
Rnf138Q9CQE0 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.71■□□□□ 0.91
Rnf138Q9CQE0 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Rnf138Q9CQE0 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Rnf138Q9CQE0 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 167.8 ms