Protein–RNA interactions for Protein: Q9CQD4

Chmp1b2, Charged multivesicular body protein 1b-2, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b2Q9CQD4 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Chmp1b2Q9CQD4 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Chmp1b2Q9CQD4 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Chmp1b2Q9CQD4 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Chmp1b2Q9CQD4 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp1b2Q9CQD4 Gm7332-201ENSMUST00000118351 454 ntBASIC20.01■□□□□ 0.79
Chmp1b2Q9CQD4 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Chmp1b2Q9CQD4 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp1b2Q9CQD4 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp1b2Q9CQD4 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Chmp1b2Q9CQD4 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp1b2Q9CQD4 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20■□□□□ 0.79
Chmp1b2Q9CQD4 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20■□□□□ 0.79
Chmp1b2Q9CQD4 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Chmp1b2Q9CQD4 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20■□□□□ 0.79
Chmp1b2Q9CQD4 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Chmp1b2Q9CQD4 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20■□□□□ 0.79
Chmp1b2Q9CQD4 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Chmp1b2Q9CQD4 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
Chmp1b2Q9CQD4 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chmp1b2Q9CQD4 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Chmp1b2Q9CQD4 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC19.99■□□□□ 0.79
Chmp1b2Q9CQD4 Gm14523-201ENSMUST00000117260 558 ntBASIC19.99■□□□□ 0.79
Chmp1b2Q9CQD4 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.99■□□□□ 0.79
Chmp1b2Q9CQD4 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chmp1b2Q9CQD4 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp1b2Q9CQD4 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.98■□□□□ 0.79
Chmp1b2Q9CQD4 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp1b2Q9CQD4 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp1b2Q9CQD4 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp1b2Q9CQD4 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp1b2Q9CQD4 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Chmp1b2Q9CQD4 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.97■□□□□ 0.79
Chmp1b2Q9CQD4 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC19.96■□□□□ 0.79
Chmp1b2Q9CQD4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp1b2Q9CQD4 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC19.96■□□□□ 0.79
Chmp1b2Q9CQD4 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.95■□□□□ 0.78
Chmp1b2Q9CQD4 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp1b2Q9CQD4 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp1b2Q9CQD4 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.95■□□□□ 0.78
Chmp1b2Q9CQD4 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp1b2Q9CQD4 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp1b2Q9CQD4 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp1b2Q9CQD4 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp1b2Q9CQD4 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp1b2Q9CQD4 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.94■□□□□ 0.78
Chmp1b2Q9CQD4 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp1b2Q9CQD4 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp1b2Q9CQD4 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp1b2Q9CQD4 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp1b2Q9CQD4 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.93■□□□□ 0.78
Chmp1b2Q9CQD4 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.93■□□□□ 0.78
Chmp1b2Q9CQD4 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.93■□□□□ 0.78
Chmp1b2Q9CQD4 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Chmp1b2Q9CQD4 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp1b2Q9CQD4 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp1b2Q9CQD4 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp1b2Q9CQD4 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.92■□□□□ 0.78
Chmp1b2Q9CQD4 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp1b2Q9CQD4 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp1b2Q9CQD4 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp1b2Q9CQD4 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp1b2Q9CQD4 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp1b2Q9CQD4 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp1b2Q9CQD4 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp1b2Q9CQD4 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.91■□□□□ 0.78
Chmp1b2Q9CQD4 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp1b2Q9CQD4 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Chmp1b2Q9CQD4 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.91■□□□□ 0.78
Chmp1b2Q9CQD4 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp1b2Q9CQD4 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp1b2Q9CQD4 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Chmp1b2Q9CQD4 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.9■□□□□ 0.78
Chmp1b2Q9CQD4 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Chmp1b2Q9CQD4 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Chmp1b2Q9CQD4 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
Chmp1b2Q9CQD4 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp1b2Q9CQD4 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp1b2Q9CQD4 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.89■□□□□ 0.77
Chmp1b2Q9CQD4 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp1b2Q9CQD4 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp1b2Q9CQD4 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Chmp1b2Q9CQD4 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Chmp1b2Q9CQD4 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Chmp1b2Q9CQD4 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Chmp1b2Q9CQD4 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp1b2Q9CQD4 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Chmp1b2Q9CQD4 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp1b2Q9CQD4 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp1b2Q9CQD4 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.88■□□□□ 0.77
Chmp1b2Q9CQD4 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp1b2Q9CQD4 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Chmp1b2Q9CQD4 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Chmp1b2Q9CQD4 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Chmp1b2Q9CQD4 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.87■□□□□ 0.77
Chmp1b2Q9CQD4 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp1b2Q9CQD4 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Chmp1b2Q9CQD4 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Chmp1b2Q9CQD4 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.86■□□□□ 0.77
Chmp1b2Q9CQD4 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms