Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm12821-201ENSMUST00000120022 600 ntBASIC23.08■■□□□ 1.29
Cdh23Q99PF4 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC23.08■■□□□ 1.29
Cdh23Q99PF4 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Cdh23Q99PF4 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cdh23Q99PF4 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
Cdh23Q99PF4 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cdh23Q99PF4 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Cdh23Q99PF4 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cdh23Q99PF4 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Cdh23Q99PF4 Gm8495-201ENSMUST00000188740 694 ntBASIC23.05■■□□□ 1.28
Cdh23Q99PF4 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC23.05■■□□□ 1.28
Cdh23Q99PF4 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Cdh23Q99PF4 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Cdh23Q99PF4 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Cdh23Q99PF4 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Cdh23Q99PF4 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC23.04■■□□□ 1.28
Cdh23Q99PF4 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Cdh23Q99PF4 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC23.03■■□□□ 1.28
Cdh23Q99PF4 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Cdh23Q99PF4 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cdh23Q99PF4 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Cdh23Q99PF4 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Cdh23Q99PF4 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Cdh23Q99PF4 AC164629.5-201ENSMUST00000220387 632 ntBASIC23.03■■□□□ 1.28
Cdh23Q99PF4 AC164433.2-201ENSMUST00000226346 1701 ntBASIC23.02■■□□□ 1.28
Cdh23Q99PF4 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Cdh23Q99PF4 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cdh23Q99PF4 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cdh23Q99PF4 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Cdh23Q99PF4 Gm16464-201ENSMUST00000117815 1095 ntBASIC23.01■■□□□ 1.27
Cdh23Q99PF4 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Cdh23Q99PF4 Flvcr1-202ENSMUST00000191946 1216 ntBASIC23■■□□□ 1.27
Cdh23Q99PF4 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Cdh23Q99PF4 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC23■■□□□ 1.27
Cdh23Q99PF4 Gm45417-201ENSMUST00000209533 758 ntBASIC23■■□□□ 1.27
Cdh23Q99PF4 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Cdh23Q99PF4 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC23■■□□□ 1.27
Cdh23Q99PF4 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC22.99■■□□□ 1.27
Cdh23Q99PF4 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC22.99■■□□□ 1.27
Cdh23Q99PF4 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC22.99■■□□□ 1.27
Cdh23Q99PF4 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Cdh23Q99PF4 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.98■■□□□ 1.27
Cdh23Q99PF4 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC22.98■■□□□ 1.27
Cdh23Q99PF4 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.98■■□□□ 1.27
Cdh23Q99PF4 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Cdh23Q99PF4 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Cdh23Q99PF4 Golgb1-201ENSMUST00000023534 498 ntBASIC22.98■■□□□ 1.27
Cdh23Q99PF4 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Cdh23Q99PF4 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC22.98■■□□□ 1.27
Cdh23Q99PF4 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Cdh23Q99PF4 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
Cdh23Q99PF4 AC116713.1-201ENSMUST00000215074 430 ntBASIC22.96■■□□□ 1.27
Cdh23Q99PF4 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cdh23Q99PF4 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Cdh23Q99PF4 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
Cdh23Q99PF4 Gm18284-201ENSMUST00000172604 624 ntBASIC22.96■■□□□ 1.27
Cdh23Q99PF4 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC22.95■■□□□ 1.27
Cdh23Q99PF4 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.27
Cdh23Q99PF4 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC22.95■■□□□ 1.27
Cdh23Q99PF4 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Cdh23Q99PF4 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Cdh23Q99PF4 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Cdh23Q99PF4 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Cdh23Q99PF4 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Cdh23Q99PF4 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC22.95■■□□□ 1.26
Cdh23Q99PF4 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Cdh23Q99PF4 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
Cdh23Q99PF4 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.94■■□□□ 1.26
Cdh23Q99PF4 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC22.93■■□□□ 1.26
Cdh23Q99PF4 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Cdh23Q99PF4 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
Cdh23Q99PF4 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Cdh23Q99PF4 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC22.92■■□□□ 1.26
Cdh23Q99PF4 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Cdh23Q99PF4 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
Cdh23Q99PF4 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
Cdh23Q99PF4 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Cdh23Q99PF4 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC22.92■■□□□ 1.26
Cdh23Q99PF4 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Cdh23Q99PF4 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Cdh23Q99PF4 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC22.91■■□□□ 1.26
Cdh23Q99PF4 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Cdh23Q99PF4 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.91■■□□□ 1.26
Cdh23Q99PF4 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Cdh23Q99PF4 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Cdh23Q99PF4 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Cdh23Q99PF4 Gm2011-201ENSMUST00000203124 1263 ntBASIC22.9■■□□□ 1.26
Cdh23Q99PF4 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Cdh23Q99PF4 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
Cdh23Q99PF4 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Cdh23Q99PF4 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Cdh23Q99PF4 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Cdh23Q99PF4 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC22.89■■□□□ 1.25
Cdh23Q99PF4 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
Cdh23Q99PF4 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Cdh23Q99PF4 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
Cdh23Q99PF4 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Cdh23Q99PF4 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC22.87■■□□□ 1.25
Cdh23Q99PF4 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Cdh23Q99PF4 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 181.8 ms