Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cdk9Q99J95 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cdk9Q99J95 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cdk9Q99J95 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.98■■□□□ 1.11
Cdk9Q99J95 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cdk9Q99J95 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cdk9Q99J95 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.98■■□□□ 1.11
Cdk9Q99J95 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cdk9Q99J95 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Cdk9Q99J95 Gm37136-201ENSMUST00000194368 194 ntBASIC21.97■■□□□ 1.11
Cdk9Q99J95 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Cdk9Q99J95 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.96■■□□□ 1.11
Cdk9Q99J95 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Cdk9Q99J95 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Cdk9Q99J95 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Cdk9Q99J95 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Cdk9Q99J95 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cdk9Q99J95 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cdk9Q99J95 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cdk9Q99J95 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.94■■□□□ 1.1
Cdk9Q99J95 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.93■■□□□ 1.1
Cdk9Q99J95 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.93■■□□□ 1.1
Cdk9Q99J95 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cdk9Q99J95 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Cdk9Q99J95 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cdk9Q99J95 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cdk9Q99J95 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cdk9Q99J95 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Cdk9Q99J95 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.92■■□□□ 1.1
Cdk9Q99J95 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Cdk9Q99J95 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cdk9Q99J95 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.91■■□□□ 1.1
Cdk9Q99J95 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cdk9Q99J95 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cdk9Q99J95 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cdk9Q99J95 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cdk9Q99J95 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.9■■□□□ 1.1
Cdk9Q99J95 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Cdk9Q99J95 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Cdk9Q99J95 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
Cdk9Q99J95 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Cdk9Q99J95 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cdk9Q99J95 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
Cdk9Q99J95 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cdk9Q99J95 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cdk9Q99J95 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Cdk9Q99J95 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cdk9Q99J95 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Cdk9Q99J95 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cdk9Q99J95 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cdk9Q99J95 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cdk9Q99J95 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cdk9Q99J95 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Cdk9Q99J95 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Cdk9Q99J95 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cdk9Q99J95 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cdk9Q99J95 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cdk9Q99J95 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.85■■□□□ 1.09
Cdk9Q99J95 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Cdk9Q99J95 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cdk9Q99J95 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Cdk9Q99J95 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Cdk9Q99J95 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cdk9Q99J95 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cdk9Q99J95 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Cdk9Q99J95 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Cdk9Q99J95 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Cdk9Q99J95 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cdk9Q99J95 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.83■■□□□ 1.09
Cdk9Q99J95 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cdk9Q99J95 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Cdk9Q99J95 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.83■■□□□ 1.08
Cdk9Q99J95 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
Cdk9Q99J95 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Cdk9Q99J95 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
Cdk9Q99J95 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cdk9Q99J95 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cdk9Q99J95 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cdk9Q99J95 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Cdk9Q99J95 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.82■■□□□ 1.08
Cdk9Q99J95 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cdk9Q99J95 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Cdk9Q99J95 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cdk9Q99J95 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cdk9Q99J95 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Cdk9Q99J95 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cdk9Q99J95 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cdk9Q99J95 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Cdk9Q99J95 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Cdk9Q99J95 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cdk9Q99J95 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.8■■□□□ 1.08
Cdk9Q99J95 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Cdk9Q99J95 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Cdk9Q99J95 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Cdk9Q99J95 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cdk9Q99J95 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cdk9Q99J95 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
Cdk9Q99J95 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Cdk9Q99J95 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cdk9Q99J95 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms