Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Col20a1Q923P0 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Col20a1Q923P0 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Col20a1Q923P0 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Col20a1Q923P0 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Col20a1Q923P0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Col20a1Q923P0 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Col20a1Q923P0 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
Col20a1Q923P0 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC26.14■■□□□ 1.78
Col20a1Q923P0 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Col20a1Q923P0 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Col20a1Q923P0 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.77
Col20a1Q923P0 Gm15820-201ENSMUST00000201566 728 ntBASIC26.14■■□□□ 1.77
Col20a1Q923P0 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
Col20a1Q923P0 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
Col20a1Q923P0 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Col20a1Q923P0 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
Col20a1Q923P0 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Col20a1Q923P0 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC26.13■■□□□ 1.77
Col20a1Q923P0 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Col20a1Q923P0 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC26.12■■□□□ 1.77
Col20a1Q923P0 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
Col20a1Q923P0 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Col20a1Q923P0 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC26.12■■□□□ 1.77
Col20a1Q923P0 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Col20a1Q923P0 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC26.11■■□□□ 1.77
Col20a1Q923P0 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Col20a1Q923P0 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Col20a1Q923P0 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
Col20a1Q923P0 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Col20a1Q923P0 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC26.11■■□□□ 1.77
Col20a1Q923P0 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Col20a1Q923P0 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Col20a1Q923P0 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Col20a1Q923P0 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
Col20a1Q923P0 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
Col20a1Q923P0 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
Col20a1Q923P0 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC26.1■■□□□ 1.77
Col20a1Q923P0 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC26.1■■□□□ 1.77
Col20a1Q923P0 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
Col20a1Q923P0 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Col20a1Q923P0 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Col20a1Q923P0 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Col20a1Q923P0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Col20a1Q923P0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Col20a1Q923P0 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
Col20a1Q923P0 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
Col20a1Q923P0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Col20a1Q923P0 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC26.08■■□□□ 1.77
Col20a1Q923P0 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Col20a1Q923P0 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Col20a1Q923P0 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Col20a1Q923P0 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Col20a1Q923P0 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Col20a1Q923P0 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Col20a1Q923P0 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC26.07■■□□□ 1.76
Col20a1Q923P0 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
Col20a1Q923P0 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC26.06■■□□□ 1.76
Col20a1Q923P0 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
Col20a1Q923P0 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC26.06■■□□□ 1.76
Col20a1Q923P0 Gm28731-201ENSMUST00000185564 1569 ntBASIC26.06■■□□□ 1.76
Col20a1Q923P0 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Col20a1Q923P0 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Col20a1Q923P0 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Col20a1Q923P0 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC26.05■■□□□ 1.76
Col20a1Q923P0 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Col20a1Q923P0 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Col20a1Q923P0 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Col20a1Q923P0 AC117245.4-201ENSMUST00000217388 1646 ntBASIC26.04■■□□□ 1.76
Col20a1Q923P0 Gm18755-201ENSMUST00000218030 1099 ntBASIC26.04■■□□□ 1.76
Col20a1Q923P0 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Col20a1Q923P0 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Col20a1Q923P0 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Col20a1Q923P0 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Col20a1Q923P0 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Col20a1Q923P0 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Col20a1Q923P0 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Col20a1Q923P0 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Col20a1Q923P0 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Col20a1Q923P0 AC093043.1-201ENSMUST00000226700 898 ntBASIC26.03■■□□□ 1.76
Col20a1Q923P0 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Col20a1Q923P0 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Col20a1Q923P0 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
Col20a1Q923P0 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Col20a1Q923P0 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Col20a1Q923P0 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Col20a1Q923P0 Gm42501-201ENSMUST00000200220 1026 ntBASIC26.02■■□□□ 1.76
Col20a1Q923P0 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Col20a1Q923P0 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC26.01■■□□□ 1.76
Col20a1Q923P0 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
Col20a1Q923P0 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Col20a1Q923P0 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Col20a1Q923P0 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC26■■□□□ 1.75
Col20a1Q923P0 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC26■■□□□ 1.75
Col20a1Q923P0 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
Col20a1Q923P0 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Col20a1Q923P0 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Col20a1Q923P0 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
Col20a1Q923P0 Gm10232-201ENSMUST00000089221 720 ntBASIC25.99■■□□□ 1.75
Col20a1Q923P0 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC25.99■■□□□ 1.75
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms