Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdhb2Q91Y00 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pcdhb2Q91Y00 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdhb2Q91Y00 Gm43592-201ENSMUST00000196922 1165 ntBASIC23.27■■□□□ 1.32
Pcdhb2Q91Y00 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Pcdhb2Q91Y00 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdhb2Q91Y00 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdhb2Q91Y00 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Pcdhb2Q91Y00 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdhb2Q91Y00 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdhb2Q91Y00 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Pcdhb2Q91Y00 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC23.25■■□□□ 1.31
Pcdhb2Q91Y00 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdhb2Q91Y00 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcdhb2Q91Y00 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC23.24■■□□□ 1.31
Pcdhb2Q91Y00 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhb2Q91Y00 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhb2Q91Y00 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhb2Q91Y00 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdhb2Q91Y00 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC23.23■■□□□ 1.31
Pcdhb2Q91Y00 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcdhb2Q91Y00 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Pcdhb2Q91Y00 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdhb2Q91Y00 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdhb2Q91Y00 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdhb2Q91Y00 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Pcdhb2Q91Y00 AC153524.1-201ENSMUST00000220436 1935 ntBASIC23.21■■□□□ 1.31
Pcdhb2Q91Y00 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Pcdhb2Q91Y00 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Pcdhb2Q91Y00 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC23.21■■□□□ 1.31
Pcdhb2Q91Y00 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhb2Q91Y00 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhb2Q91Y00 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC23.2■■□□□ 1.3
Pcdhb2Q91Y00 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhb2Q91Y00 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC23.2■■□□□ 1.3
Pcdhb2Q91Y00 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhb2Q91Y00 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhb2Q91Y00 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhb2Q91Y00 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhb2Q91Y00 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhb2Q91Y00 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Pcdhb2Q91Y00 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdhb2Q91Y00 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
Pcdhb2Q91Y00 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdhb2Q91Y00 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdhb2Q91Y00 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Pcdhb2Q91Y00 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhb2Q91Y00 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Pcdhb2Q91Y00 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhb2Q91Y00 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhb2Q91Y00 Gm5921-201ENSMUST00000075898 882 ntBASIC23.17■■□□□ 1.3
Pcdhb2Q91Y00 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Pcdhb2Q91Y00 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdhb2Q91Y00 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdhb2Q91Y00 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Pcdhb2Q91Y00 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Pcdhb2Q91Y00 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhb2Q91Y00 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
Pcdhb2Q91Y00 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC23.15■■□□□ 1.3
Pcdhb2Q91Y00 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhb2Q91Y00 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhb2Q91Y00 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Pcdhb2Q91Y00 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Pcdhb2Q91Y00 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdhb2Q91Y00 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC23.14■■□□□ 1.29
Pcdhb2Q91Y00 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdhb2Q91Y00 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdhb2Q91Y00 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Pcdhb2Q91Y00 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdhb2Q91Y00 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdhb2Q91Y00 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC23.13■■□□□ 1.29
Pcdhb2Q91Y00 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Pcdhb2Q91Y00 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhb2Q91Y00 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhb2Q91Y00 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhb2Q91Y00 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhb2Q91Y00 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC23.12■■□□□ 1.29
Pcdhb2Q91Y00 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhb2Q91Y00 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Pcdhb2Q91Y00 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhb2Q91Y00 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhb2Q91Y00 Gm28731-201ENSMUST00000185564 1569 ntBASIC23.11■■□□□ 1.29
Pcdhb2Q91Y00 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhb2Q91Y00 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Pcdhb2Q91Y00 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC23.1■■□□□ 1.29
Pcdhb2Q91Y00 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC23.1■■□□□ 1.29
Pcdhb2Q91Y00 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdhb2Q91Y00 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdhb2Q91Y00 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdhb2Q91Y00 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Pcdhb2Q91Y00 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Pcdhb2Q91Y00 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhb2Q91Y00 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC23.09■■□□□ 1.29
Pcdhb2Q91Y00 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC23.09■■□□□ 1.29
Pcdhb2Q91Y00 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhb2Q91Y00 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhb2Q91Y00 Gm6934-201ENSMUST00000194780 1905 ntBASIC23.08■■□□□ 1.29
Pcdhb2Q91Y00 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhb2Q91Y00 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhb2Q91Y00 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 113.8 ms