Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhga3Q91XY5 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhga3Q91XY5 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdhga3Q91XY5 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhga3Q91XY5 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.37■□□□□ 0.69
Pcdhga3Q91XY5 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.37■□□□□ 0.69
Pcdhga3Q91XY5 Gm11687-201ENSMUST00000118911 886 ntBASIC19.37■□□□□ 0.69
Pcdhga3Q91XY5 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhga3Q91XY5 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdhga3Q91XY5 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhga3Q91XY5 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhga3Q91XY5 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhga3Q91XY5 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhga3Q91XY5 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Pcdhga3Q91XY5 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhga3Q91XY5 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Pcdhga3Q91XY5 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhga3Q91XY5 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhga3Q91XY5 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Pcdhga3Q91XY5 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhga3Q91XY5 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Pcdhga3Q91XY5 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdhga3Q91XY5 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdhga3Q91XY5 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC19.35■□□□□ 0.69
Pcdhga3Q91XY5 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.35■□□□□ 0.69
Pcdhga3Q91XY5 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhga3Q91XY5 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhga3Q91XY5 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhga3Q91XY5 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhga3Q91XY5 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhga3Q91XY5 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhga3Q91XY5 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhga3Q91XY5 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhga3Q91XY5 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhga3Q91XY5 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Pcdhga3Q91XY5 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
Pcdhga3Q91XY5 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Pcdhga3Q91XY5 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Pcdhga3Q91XY5 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhga3Q91XY5 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
Pcdhga3Q91XY5 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhga3Q91XY5 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhga3Q91XY5 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhga3Q91XY5 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhga3Q91XY5 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Pcdhga3Q91XY5 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.32■□□□□ 0.68
Pcdhga3Q91XY5 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhga3Q91XY5 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Pcdhga3Q91XY5 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhga3Q91XY5 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhga3Q91XY5 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhga3Q91XY5 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Pcdhga3Q91XY5 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhga3Q91XY5 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhga3Q91XY5 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhga3Q91XY5 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhga3Q91XY5 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhga3Q91XY5 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC19.3■□□□□ 0.68
Pcdhga3Q91XY5 Gm44428-201ENSMUST00000204474 874 ntBASIC19.3■□□□□ 0.68
Pcdhga3Q91XY5 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhga3Q91XY5 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhga3Q91XY5 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhga3Q91XY5 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhga3Q91XY5 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC19.29■□□□□ 0.68
Pcdhga3Q91XY5 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhga3Q91XY5 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhga3Q91XY5 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhga3Q91XY5 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.28■□□□□ 0.68
Pcdhga3Q91XY5 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhga3Q91XY5 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.28■□□□□ 0.68
Pcdhga3Q91XY5 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.28■□□□□ 0.68
Pcdhga3Q91XY5 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhga3Q91XY5 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhga3Q91XY5 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhga3Q91XY5 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhga3Q91XY5 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhga3Q91XY5 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC19.27■□□□□ 0.68
Pcdhga3Q91XY5 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Pcdhga3Q91XY5 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Pcdhga3Q91XY5 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhga3Q91XY5 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdhga3Q91XY5 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhga3Q91XY5 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhga3Q91XY5 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhga3Q91XY5 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhga3Q91XY5 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhga3Q91XY5 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhga3Q91XY5 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Pcdhga3Q91XY5 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Pcdhga3Q91XY5 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhga3Q91XY5 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhga3Q91XY5 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
Pcdhga3Q91XY5 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhga3Q91XY5 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Pcdhga3Q91XY5 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.24■□□□□ 0.67
Pcdhga3Q91XY5 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdhga3Q91XY5 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Pcdhga3Q91XY5 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Pcdhga3Q91XY5 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Pcdhga3Q91XY5 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 10 ms