Protein–RNA interactions for Protein: Q91VA1

Slc44a4, Choline transporter-like protein 4, mousemouse

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a4Q91VA1 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC26.33■■□□□ 1.81
Slc44a4Q91VA1 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
Slc44a4Q91VA1 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Slc44a4Q91VA1 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC26.32■■□□□ 1.8
Slc44a4Q91VA1 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Slc44a4Q91VA1 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
Slc44a4Q91VA1 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
Slc44a4Q91VA1 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Slc44a4Q91VA1 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Slc44a4Q91VA1 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Slc44a4Q91VA1 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
Slc44a4Q91VA1 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC26.32■■□□□ 1.8
Slc44a4Q91VA1 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Slc44a4Q91VA1 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
Slc44a4Q91VA1 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Slc44a4Q91VA1 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Slc44a4Q91VA1 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
Slc44a4Q91VA1 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Slc44a4Q91VA1 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC26.3■■□□□ 1.8
Slc44a4Q91VA1 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Slc44a4Q91VA1 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
Slc44a4Q91VA1 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
Slc44a4Q91VA1 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
Slc44a4Q91VA1 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC26.29■■□□□ 1.8
Slc44a4Q91VA1 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
Slc44a4Q91VA1 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Slc44a4Q91VA1 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Slc44a4Q91VA1 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
Slc44a4Q91VA1 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Slc44a4Q91VA1 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Slc44a4Q91VA1 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Slc44a4Q91VA1 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
Slc44a4Q91VA1 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Slc44a4Q91VA1 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Slc44a4Q91VA1 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC26.27■■□□□ 1.8
Slc44a4Q91VA1 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Slc44a4Q91VA1 AC153524.1-201ENSMUST00000220436 1935 ntBASIC26.26■■□□□ 1.79
Slc44a4Q91VA1 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Slc44a4Q91VA1 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Slc44a4Q91VA1 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Slc44a4Q91VA1 Etf1-202ENSMUST00000180351 108 ntBASIC26.26■■□□□ 1.79
Slc44a4Q91VA1 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC26.25■■□□□ 1.79
Slc44a4Q91VA1 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC26.25■■□□□ 1.79
Slc44a4Q91VA1 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
Slc44a4Q91VA1 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Slc44a4Q91VA1 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Slc44a4Q91VA1 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Slc44a4Q91VA1 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Slc44a4Q91VA1 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Slc44a4Q91VA1 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Slc44a4Q91VA1 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC26.24■■□□□ 1.79
Slc44a4Q91VA1 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Slc44a4Q91VA1 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC26.23■■□□□ 1.79
Slc44a4Q91VA1 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC26.23■■□□□ 1.79
Slc44a4Q91VA1 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Slc44a4Q91VA1 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC26.23■■□□□ 1.79
Slc44a4Q91VA1 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
Slc44a4Q91VA1 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC26.23■■□□□ 1.79
Slc44a4Q91VA1 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Slc44a4Q91VA1 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Slc44a4Q91VA1 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC26.22■■□□□ 1.79
Slc44a4Q91VA1 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Slc44a4Q91VA1 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC26.21■■□□□ 1.79
Slc44a4Q91VA1 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC26.21■■□□□ 1.79
Slc44a4Q91VA1 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Slc44a4Q91VA1 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Slc44a4Q91VA1 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Slc44a4Q91VA1 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Slc44a4Q91VA1 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Slc44a4Q91VA1 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
Slc44a4Q91VA1 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC26.19■■□□□ 1.78
Slc44a4Q91VA1 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Slc44a4Q91VA1 Gm16464-201ENSMUST00000117815 1095 ntBASIC26.19■■□□□ 1.78
Slc44a4Q91VA1 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC26.19■■□□□ 1.78
Slc44a4Q91VA1 Gm5131-201ENSMUST00000212776 1238 ntBASIC26.19■■□□□ 1.78
Slc44a4Q91VA1 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Slc44a4Q91VA1 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Slc44a4Q91VA1 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Slc44a4Q91VA1 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Slc44a4Q91VA1 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Slc44a4Q91VA1 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC26.18■■□□□ 1.78
Slc44a4Q91VA1 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Slc44a4Q91VA1 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Slc44a4Q91VA1 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
Slc44a4Q91VA1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC26.17■■□□□ 1.78
Slc44a4Q91VA1 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC26.17■■□□□ 1.78
Slc44a4Q91VA1 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC26.17■■□□□ 1.78
Slc44a4Q91VA1 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC26.17■■□□□ 1.78
Slc44a4Q91VA1 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC26.17■■□□□ 1.78
Slc44a4Q91VA1 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Slc44a4Q91VA1 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Slc44a4Q91VA1 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Slc44a4Q91VA1 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Slc44a4Q91VA1 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC26.16■■□□□ 1.78
Slc44a4Q91VA1 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC26.16■■□□□ 1.78
Slc44a4Q91VA1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Slc44a4Q91VA1 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Slc44a4Q91VA1 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Slc44a4Q91VA1 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC26.15■■□□□ 1.78
Slc44a4Q91VA1 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC26.15■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms