Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Gm9806-201ENSMUST00000051080 552 ntBASIC18.29■□□□□ 0.52
H1fooQ8VIK3 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
H1fooQ8VIK3 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
H1fooQ8VIK3 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
H1fooQ8VIK3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
H1fooQ8VIK3 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
H1fooQ8VIK3 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
H1fooQ8VIK3 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
H1fooQ8VIK3 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
H1fooQ8VIK3 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
H1fooQ8VIK3 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
H1fooQ8VIK3 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
H1fooQ8VIK3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
H1fooQ8VIK3 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
H1fooQ8VIK3 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
H1fooQ8VIK3 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
H1fooQ8VIK3 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
H1fooQ8VIK3 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
H1fooQ8VIK3 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
H1fooQ8VIK3 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
H1fooQ8VIK3 Gm16437-201ENSMUST00000025669 507 ntBASIC18.27■□□□□ 0.52
H1fooQ8VIK3 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
H1fooQ8VIK3 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
H1fooQ8VIK3 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
H1fooQ8VIK3 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
H1fooQ8VIK3 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
H1fooQ8VIK3 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
H1fooQ8VIK3 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
H1fooQ8VIK3 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
H1fooQ8VIK3 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC18.25■□□□□ 0.51
H1fooQ8VIK3 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.25■□□□□ 0.51
H1fooQ8VIK3 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
H1fooQ8VIK3 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
H1fooQ8VIK3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
H1fooQ8VIK3 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
H1fooQ8VIK3 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
H1fooQ8VIK3 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
H1fooQ8VIK3 Gm11687-201ENSMUST00000118911 886 ntBASIC18.24■□□□□ 0.51
H1fooQ8VIK3 Gm44428-201ENSMUST00000204474 874 ntBASIC18.24■□□□□ 0.51
H1fooQ8VIK3 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
H1fooQ8VIK3 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
H1fooQ8VIK3 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
H1fooQ8VIK3 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
H1fooQ8VIK3 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
H1fooQ8VIK3 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
H1fooQ8VIK3 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
H1fooQ8VIK3 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
H1fooQ8VIK3 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
H1fooQ8VIK3 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
H1fooQ8VIK3 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
H1fooQ8VIK3 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.22■□□□□ 0.51
H1fooQ8VIK3 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
H1fooQ8VIK3 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
H1fooQ8VIK3 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.22■□□□□ 0.51
H1fooQ8VIK3 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.22■□□□□ 0.51
H1fooQ8VIK3 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
H1fooQ8VIK3 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
H1fooQ8VIK3 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
H1fooQ8VIK3 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
H1fooQ8VIK3 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
H1fooQ8VIK3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
H1fooQ8VIK3 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
H1fooQ8VIK3 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.21■□□□□ 0.51
H1fooQ8VIK3 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
H1fooQ8VIK3 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
H1fooQ8VIK3 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.21■□□□□ 0.51
H1fooQ8VIK3 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
H1fooQ8VIK3 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
H1fooQ8VIK3 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
H1fooQ8VIK3 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
H1fooQ8VIK3 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
H1fooQ8VIK3 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
H1fooQ8VIK3 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
H1fooQ8VIK3 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
H1fooQ8VIK3 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.21■□□□□ 0.5
H1fooQ8VIK3 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
H1fooQ8VIK3 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
H1fooQ8VIK3 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
H1fooQ8VIK3 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
H1fooQ8VIK3 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC18.2■□□□□ 0.5
H1fooQ8VIK3 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
H1fooQ8VIK3 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
H1fooQ8VIK3 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
H1fooQ8VIK3 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
H1fooQ8VIK3 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
H1fooQ8VIK3 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
H1fooQ8VIK3 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
H1fooQ8VIK3 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
H1fooQ8VIK3 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
H1fooQ8VIK3 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
H1fooQ8VIK3 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
H1fooQ8VIK3 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H1fooQ8VIK3 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
H1fooQ8VIK3 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
H1fooQ8VIK3 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H1fooQ8VIK3 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H1fooQ8VIK3 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
H1fooQ8VIK3 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H1fooQ8VIK3 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
H1fooQ8VIK3 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms