Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rab40bQ8VHP8 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rab40bQ8VHP8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rab40bQ8VHP8 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rab40bQ8VHP8 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Rab40bQ8VHP8 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rab40bQ8VHP8 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rab40bQ8VHP8 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rab40bQ8VHP8 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.7■□□□□ 0.74
Rab40bQ8VHP8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Rab40bQ8VHP8 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rab40bQ8VHP8 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rab40bQ8VHP8 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.7■□□□□ 0.74
Rab40bQ8VHP8 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rab40bQ8VHP8 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rab40bQ8VHP8 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.69■□□□□ 0.74
Rab40bQ8VHP8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rab40bQ8VHP8 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rab40bQ8VHP8 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rab40bQ8VHP8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rab40bQ8VHP8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.68■□□□□ 0.74
Rab40bQ8VHP8 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Rab40bQ8VHP8 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rab40bQ8VHP8 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Rab40bQ8VHP8 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rab40bQ8VHP8 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.68■□□□□ 0.74
Rab40bQ8VHP8 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rab40bQ8VHP8 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rab40bQ8VHP8 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Rab40bQ8VHP8 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Rab40bQ8VHP8 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.67■□□□□ 0.74
Rab40bQ8VHP8 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rab40bQ8VHP8 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rab40bQ8VHP8 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rab40bQ8VHP8 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rab40bQ8VHP8 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rab40bQ8VHP8 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rab40bQ8VHP8 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rab40bQ8VHP8 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rab40bQ8VHP8 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rab40bQ8VHP8 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rab40bQ8VHP8 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Rab40bQ8VHP8 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rab40bQ8VHP8 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Rab40bQ8VHP8 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.65■□□□□ 0.74
Rab40bQ8VHP8 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.65■□□□□ 0.74
Rab40bQ8VHP8 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rab40bQ8VHP8 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rab40bQ8VHP8 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Rab40bQ8VHP8 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rab40bQ8VHP8 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.64■□□□□ 0.73
Rab40bQ8VHP8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rab40bQ8VHP8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Rab40bQ8VHP8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.64■□□□□ 0.73
Rab40bQ8VHP8 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rab40bQ8VHP8 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rab40bQ8VHP8 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rab40bQ8VHP8 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.63■□□□□ 0.73
Rab40bQ8VHP8 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Rab40bQ8VHP8 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rab40bQ8VHP8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.63■□□□□ 0.73
Rab40bQ8VHP8 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rab40bQ8VHP8 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rab40bQ8VHP8 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Rab40bQ8VHP8 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Rab40bQ8VHP8 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rab40bQ8VHP8 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.62■□□□□ 0.73
Rab40bQ8VHP8 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.62■□□□□ 0.73
Rab40bQ8VHP8 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rab40bQ8VHP8 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
Rab40bQ8VHP8 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Rab40bQ8VHP8 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rab40bQ8VHP8 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rab40bQ8VHP8 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rab40bQ8VHP8 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rab40bQ8VHP8 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rab40bQ8VHP8 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rab40bQ8VHP8 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rab40bQ8VHP8 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rab40bQ8VHP8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rab40bQ8VHP8 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Rab40bQ8VHP8 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rab40bQ8VHP8 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rab40bQ8VHP8 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rab40bQ8VHP8 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rab40bQ8VHP8 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.6■□□□□ 0.73
Rab40bQ8VHP8 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rab40bQ8VHP8 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rab40bQ8VHP8 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rab40bQ8VHP8 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rab40bQ8VHP8 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rab40bQ8VHP8 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.59■□□□□ 0.73
Rab40bQ8VHP8 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rab40bQ8VHP8 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rab40bQ8VHP8 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rab40bQ8VHP8 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rab40bQ8VHP8 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rab40bQ8VHP8 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.58■□□□□ 0.73
Rab40bQ8VHP8 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.58■□□□□ 0.72
Rab40bQ8VHP8 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms