Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vmn1r28Q8R2C9 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Vmn1r28Q8R2C9 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vmn1r28Q8R2C9 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vmn1r28Q8R2C9 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vmn1r28Q8R2C9 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Vmn1r28Q8R2C9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.13■□□□□ 0.81
Vmn1r28Q8R2C9 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vmn1r28Q8R2C9 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vmn1r28Q8R2C9 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Vmn1r28Q8R2C9 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Vmn1r28Q8R2C9 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Vmn1r28Q8R2C9 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.12■□□□□ 0.81
Vmn1r28Q8R2C9 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vmn1r28Q8R2C9 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Vmn1r28Q8R2C9 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.12■□□□□ 0.81
Vmn1r28Q8R2C9 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Vmn1r28Q8R2C9 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vmn1r28Q8R2C9 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vmn1r28Q8R2C9 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vmn1r28Q8R2C9 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vmn1r28Q8R2C9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vmn1r28Q8R2C9 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vmn1r28Q8R2C9 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vmn1r28Q8R2C9 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.1■□□□□ 0.81
Vmn1r28Q8R2C9 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vmn1r28Q8R2C9 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vmn1r28Q8R2C9 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vmn1r28Q8R2C9 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vmn1r28Q8R2C9 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vmn1r28Q8R2C9 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vmn1r28Q8R2C9 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.09■□□□□ 0.81
Vmn1r28Q8R2C9 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vmn1r28Q8R2C9 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Vmn1r28Q8R2C9 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.09■□□□□ 0.81
Vmn1r28Q8R2C9 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Vmn1r28Q8R2C9 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Vmn1r28Q8R2C9 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Vmn1r28Q8R2C9 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Vmn1r28Q8R2C9 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vmn1r28Q8R2C9 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vmn1r28Q8R2C9 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Vmn1r28Q8R2C9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Vmn1r28Q8R2C9 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Vmn1r28Q8R2C9 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vmn1r28Q8R2C9 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Vmn1r28Q8R2C9 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.06■□□□□ 0.8
Vmn1r28Q8R2C9 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Vmn1r28Q8R2C9 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vmn1r28Q8R2C9 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vmn1r28Q8R2C9 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vmn1r28Q8R2C9 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vmn1r28Q8R2C9 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.05■□□□□ 0.8
Vmn1r28Q8R2C9 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.05■□□□□ 0.8
Vmn1r28Q8R2C9 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.05■□□□□ 0.8
Vmn1r28Q8R2C9 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vmn1r28Q8R2C9 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vmn1r28Q8R2C9 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.04■□□□□ 0.8
Vmn1r28Q8R2C9 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.04■□□□□ 0.8
Vmn1r28Q8R2C9 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vmn1r28Q8R2C9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Vmn1r28Q8R2C9 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vmn1r28Q8R2C9 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vmn1r28Q8R2C9 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vmn1r28Q8R2C9 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vmn1r28Q8R2C9 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vmn1r28Q8R2C9 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.03■□□□□ 0.8
Vmn1r28Q8R2C9 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vmn1r28Q8R2C9 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.03■□□□□ 0.8
Vmn1r28Q8R2C9 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vmn1r28Q8R2C9 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vmn1r28Q8R2C9 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Vmn1r28Q8R2C9 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Vmn1r28Q8R2C9 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vmn1r28Q8R2C9 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vmn1r28Q8R2C9 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.02■□□□□ 0.8
Vmn1r28Q8R2C9 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vmn1r28Q8R2C9 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.02■□□□□ 0.8
Vmn1r28Q8R2C9 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Vmn1r28Q8R2C9 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.01■□□□□ 0.79
Vmn1r28Q8R2C9 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vmn1r28Q8R2C9 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vmn1r28Q8R2C9 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Vmn1r28Q8R2C9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vmn1r28Q8R2C9 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vmn1r28Q8R2C9 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20■□□□□ 0.79
Vmn1r28Q8R2C9 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20■□□□□ 0.79
Vmn1r28Q8R2C9 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20■□□□□ 0.79
Vmn1r28Q8R2C9 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20■□□□□ 0.79
Vmn1r28Q8R2C9 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vmn1r28Q8R2C9 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Vmn1r28Q8R2C9 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Vmn1r28Q8R2C9 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vmn1r28Q8R2C9 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20■□□□□ 0.79
Vmn1r28Q8R2C9 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Vmn1r28Q8R2C9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Vmn1r28Q8R2C9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vmn1r28Q8R2C9 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Vmn1r28Q8R2C9 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Vmn1r28Q8R2C9 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms