Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
H2afjQ8R1M2 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
H2afjQ8R1M2 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
H2afjQ8R1M2 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.27■□□□□ 0.84
H2afjQ8R1M2 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
H2afjQ8R1M2 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
H2afjQ8R1M2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
H2afjQ8R1M2 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
H2afjQ8R1M2 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
H2afjQ8R1M2 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
H2afjQ8R1M2 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
H2afjQ8R1M2 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
H2afjQ8R1M2 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
H2afjQ8R1M2 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.25■□□□□ 0.83
H2afjQ8R1M2 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
H2afjQ8R1M2 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
H2afjQ8R1M2 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
H2afjQ8R1M2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
H2afjQ8R1M2 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
H2afjQ8R1M2 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
H2afjQ8R1M2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
H2afjQ8R1M2 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
H2afjQ8R1M2 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.24■□□□□ 0.83
H2afjQ8R1M2 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
H2afjQ8R1M2 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.24■□□□□ 0.83
H2afjQ8R1M2 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
H2afjQ8R1M2 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
H2afjQ8R1M2 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
H2afjQ8R1M2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
H2afjQ8R1M2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
H2afjQ8R1M2 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
H2afjQ8R1M2 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
H2afjQ8R1M2 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
H2afjQ8R1M2 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
H2afjQ8R1M2 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.22■□□□□ 0.83
H2afjQ8R1M2 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
H2afjQ8R1M2 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.22■□□□□ 0.83
H2afjQ8R1M2 Gm9812-201ENSMUST00000061934 968 ntBASIC20.22■□□□□ 0.83
H2afjQ8R1M2 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
H2afjQ8R1M2 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
H2afjQ8R1M2 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
H2afjQ8R1M2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
H2afjQ8R1M2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.21■□□□□ 0.83
H2afjQ8R1M2 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
H2afjQ8R1M2 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
H2afjQ8R1M2 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
H2afjQ8R1M2 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
H2afjQ8R1M2 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
H2afjQ8R1M2 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.21■□□□□ 0.83
H2afjQ8R1M2 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.2■□□□□ 0.82
H2afjQ8R1M2 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
H2afjQ8R1M2 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
H2afjQ8R1M2 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
H2afjQ8R1M2 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
H2afjQ8R1M2 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
H2afjQ8R1M2 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
H2afjQ8R1M2 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
H2afjQ8R1M2 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
H2afjQ8R1M2 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
H2afjQ8R1M2 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.19■□□□□ 0.82
H2afjQ8R1M2 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
H2afjQ8R1M2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
H2afjQ8R1M2 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
H2afjQ8R1M2 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
H2afjQ8R1M2 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
H2afjQ8R1M2 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
H2afjQ8R1M2 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
H2afjQ8R1M2 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
H2afjQ8R1M2 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.18■□□□□ 0.82
H2afjQ8R1M2 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
H2afjQ8R1M2 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
H2afjQ8R1M2 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
H2afjQ8R1M2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
H2afjQ8R1M2 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.17■□□□□ 0.82
H2afjQ8R1M2 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
H2afjQ8R1M2 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.17■□□□□ 0.82
H2afjQ8R1M2 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
H2afjQ8R1M2 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
H2afjQ8R1M2 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.16■□□□□ 0.82
H2afjQ8R1M2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
H2afjQ8R1M2 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
H2afjQ8R1M2 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
H2afjQ8R1M2 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
H2afjQ8R1M2 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.16■□□□□ 0.82
H2afjQ8R1M2 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
H2afjQ8R1M2 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
H2afjQ8R1M2 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
H2afjQ8R1M2 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
H2afjQ8R1M2 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
H2afjQ8R1M2 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
H2afjQ8R1M2 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.14■□□□□ 0.81
H2afjQ8R1M2 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
H2afjQ8R1M2 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
H2afjQ8R1M2 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
H2afjQ8R1M2 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
H2afjQ8R1M2 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
H2afjQ8R1M2 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
H2afjQ8R1M2 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
H2afjQ8R1M2 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
H2afjQ8R1M2 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms