Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC26.83■■□□□ 1.89
Sf3a1Q8K4Z5 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Sf3a1Q8K4Z5 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Sf3a1Q8K4Z5 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC26.83■■□□□ 1.89
Sf3a1Q8K4Z5 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Sf3a1Q8K4Z5 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC26.83■■□□□ 1.89
Sf3a1Q8K4Z5 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
Sf3a1Q8K4Z5 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Sf3a1Q8K4Z5 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Sf3a1Q8K4Z5 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC26.81■■□□□ 1.88
Sf3a1Q8K4Z5 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Sf3a1Q8K4Z5 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC26.81■■□□□ 1.88
Sf3a1Q8K4Z5 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Sf3a1Q8K4Z5 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC26.8■■□□□ 1.88
Sf3a1Q8K4Z5 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Sf3a1Q8K4Z5 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Sf3a1Q8K4Z5 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Sf3a1Q8K4Z5 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC26.8■■□□□ 1.88
Sf3a1Q8K4Z5 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Sf3a1Q8K4Z5 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC26.79■■□□□ 1.88
Sf3a1Q8K4Z5 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Sf3a1Q8K4Z5 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
Sf3a1Q8K4Z5 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
Sf3a1Q8K4Z5 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Sf3a1Q8K4Z5 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Sf3a1Q8K4Z5 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Sf3a1Q8K4Z5 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Sf3a1Q8K4Z5 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Sf3a1Q8K4Z5 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Sf3a1Q8K4Z5 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
Sf3a1Q8K4Z5 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Sf3a1Q8K4Z5 Gm5067-201ENSMUST00000170449 1009 ntBASIC26.77■■□□□ 1.88
Sf3a1Q8K4Z5 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
Sf3a1Q8K4Z5 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
Sf3a1Q8K4Z5 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC26.76■■□□□ 1.87
Sf3a1Q8K4Z5 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Sf3a1Q8K4Z5 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Sf3a1Q8K4Z5 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Sf3a1Q8K4Z5 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Sf3a1Q8K4Z5 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Sf3a1Q8K4Z5 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Sf3a1Q8K4Z5 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Sf3a1Q8K4Z5 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Sf3a1Q8K4Z5 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Sf3a1Q8K4Z5 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Sf3a1Q8K4Z5 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
Sf3a1Q8K4Z5 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Sf3a1Q8K4Z5 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Sf3a1Q8K4Z5 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Sf3a1Q8K4Z5 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Sf3a1Q8K4Z5 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Sf3a1Q8K4Z5 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Sf3a1Q8K4Z5 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
Sf3a1Q8K4Z5 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC26.74■■□□□ 1.87
Sf3a1Q8K4Z5 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
Sf3a1Q8K4Z5 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Sf3a1Q8K4Z5 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
Sf3a1Q8K4Z5 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Sf3a1Q8K4Z5 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
Sf3a1Q8K4Z5 Gm43592-201ENSMUST00000196922 1165 ntBASIC26.72■■□□□ 1.87
Sf3a1Q8K4Z5 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Sf3a1Q8K4Z5 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC26.72■■□□□ 1.87
Sf3a1Q8K4Z5 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Sf3a1Q8K4Z5 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Sf3a1Q8K4Z5 AC117245.4-201ENSMUST00000217388 1646 ntBASIC26.71■■□□□ 1.87
Sf3a1Q8K4Z5 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC26.7■■□□□ 1.87
Sf3a1Q8K4Z5 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC26.7■■□□□ 1.87
Sf3a1Q8K4Z5 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.87
Sf3a1Q8K4Z5 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
Sf3a1Q8K4Z5 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC26.7■■□□□ 1.86
Sf3a1Q8K4Z5 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Sf3a1Q8K4Z5 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Sf3a1Q8K4Z5 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC26.7■■□□□ 1.86
Sf3a1Q8K4Z5 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Sf3a1Q8K4Z5 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.86
Sf3a1Q8K4Z5 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
Sf3a1Q8K4Z5 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Sf3a1Q8K4Z5 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Sf3a1Q8K4Z5 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Sf3a1Q8K4Z5 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC26.68■■□□□ 1.86
Sf3a1Q8K4Z5 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Sf3a1Q8K4Z5 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
Sf3a1Q8K4Z5 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Sf3a1Q8K4Z5 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC26.68■■□□□ 1.86
Sf3a1Q8K4Z5 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Sf3a1Q8K4Z5 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Sf3a1Q8K4Z5 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Sf3a1Q8K4Z5 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC26.67■■□□□ 1.86
Sf3a1Q8K4Z5 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
Sf3a1Q8K4Z5 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Sf3a1Q8K4Z5 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Sf3a1Q8K4Z5 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
Sf3a1Q8K4Z5 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Sf3a1Q8K4Z5 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
Sf3a1Q8K4Z5 H3f3aos-201ENSMUST00000097448 2905 ntBASIC26.65■■□□□ 1.86
Sf3a1Q8K4Z5 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Sf3a1Q8K4Z5 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Sf3a1Q8K4Z5 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Sf3a1Q8K4Z5 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC26.64■■□□□ 1.86
Sf3a1Q8K4Z5 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms