Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Ebf4Q8K4J2 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.04■□□□□ 0.8
Ebf4Q8K4J2 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ebf4Q8K4J2 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ebf4Q8K4J2 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Ebf4Q8K4J2 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ebf4Q8K4J2 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Ebf4Q8K4J2 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
Ebf4Q8K4J2 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ebf4Q8K4J2 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Ebf4Q8K4J2 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.02■□□□□ 0.8
Ebf4Q8K4J2 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Ebf4Q8K4J2 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Ebf4Q8K4J2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Ebf4Q8K4J2 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ebf4Q8K4J2 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Ebf4Q8K4J2 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.01■□□□□ 0.79
Ebf4Q8K4J2 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ebf4Q8K4J2 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20■□□□□ 0.79
Ebf4Q8K4J2 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Ebf4Q8K4J2 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ebf4Q8K4J2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ebf4Q8K4J2 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ebf4Q8K4J2 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ebf4Q8K4J2 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ebf4Q8K4J2 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.98■□□□□ 0.79
Ebf4Q8K4J2 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.98■□□□□ 0.79
Ebf4Q8K4J2 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ebf4Q8K4J2 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ebf4Q8K4J2 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ebf4Q8K4J2 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ebf4Q8K4J2 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ebf4Q8K4J2 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ebf4Q8K4J2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ebf4Q8K4J2 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ebf4Q8K4J2 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ebf4Q8K4J2 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ebf4Q8K4J2 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ebf4Q8K4J2 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ebf4Q8K4J2 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ebf4Q8K4J2 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.96■□□□□ 0.79
Ebf4Q8K4J2 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ebf4Q8K4J2 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ebf4Q8K4J2 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ebf4Q8K4J2 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Ebf4Q8K4J2 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ebf4Q8K4J2 Gm24970-201ENSMUST00000175582 82 ntBASIC19.95■□□□□ 0.78
Ebf4Q8K4J2 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ebf4Q8K4J2 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ebf4Q8K4J2 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ebf4Q8K4J2 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ebf4Q8K4J2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ebf4Q8K4J2 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.94■□□□□ 0.78
Ebf4Q8K4J2 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ebf4Q8K4J2 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
Ebf4Q8K4J2 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ebf4Q8K4J2 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ebf4Q8K4J2 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ebf4Q8K4J2 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.94■□□□□ 0.78
Ebf4Q8K4J2 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ebf4Q8K4J2 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC19.94■□□□□ 0.78
Ebf4Q8K4J2 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ebf4Q8K4J2 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ebf4Q8K4J2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ebf4Q8K4J2 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.92■□□□□ 0.78
Ebf4Q8K4J2 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.92■□□□□ 0.78
Ebf4Q8K4J2 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC19.92■□□□□ 0.78
Ebf4Q8K4J2 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ebf4Q8K4J2 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ebf4Q8K4J2 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ebf4Q8K4J2 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Ebf4Q8K4J2 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Ebf4Q8K4J2 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ebf4Q8K4J2 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ebf4Q8K4J2 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ebf4Q8K4J2 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ebf4Q8K4J2 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ebf4Q8K4J2 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ebf4Q8K4J2 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ebf4Q8K4J2 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Ebf4Q8K4J2 Zfp131-205ENSMUST00000223812 663 ntBASIC19.9■□□□□ 0.78
Ebf4Q8K4J2 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ebf4Q8K4J2 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ebf4Q8K4J2 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
Ebf4Q8K4J2 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ebf4Q8K4J2 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ebf4Q8K4J2 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ebf4Q8K4J2 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ebf4Q8K4J2 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ebf4Q8K4J2 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ebf4Q8K4J2 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ebf4Q8K4J2 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ebf4Q8K4J2 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ebf4Q8K4J2 AC164433.2-201ENSMUST00000226346 1701 ntBASIC19.88■□□□□ 0.77
Ebf4Q8K4J2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ebf4Q8K4J2 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ebf4Q8K4J2 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.87■□□□□ 0.77
Ebf4Q8K4J2 Gm37136-201ENSMUST00000194368 194 ntBASIC19.87■□□□□ 0.77
Ebf4Q8K4J2 Gm9397-201ENSMUST00000200125 605 ntBASIC19.87■□□□□ 0.77
Ebf4Q8K4J2 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms