Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Depdc1aQ8CIG0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC25.03■■□□□ 1.6
Depdc1aQ8CIG0 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Depdc1aQ8CIG0 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Depdc1aQ8CIG0 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Depdc1aQ8CIG0 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC25.03■■□□□ 1.6
Depdc1aQ8CIG0 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
Depdc1aQ8CIG0 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Depdc1aQ8CIG0 AC117245.4-201ENSMUST00000217388 1646 ntBASIC25.02■■□□□ 1.6
Depdc1aQ8CIG0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC25.02■■□□□ 1.6
Depdc1aQ8CIG0 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
Depdc1aQ8CIG0 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Depdc1aQ8CIG0 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC25.01■■□□□ 1.59
Depdc1aQ8CIG0 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Depdc1aQ8CIG0 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Depdc1aQ8CIG0 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC25■■□□□ 1.59
Depdc1aQ8CIG0 Gm28731-201ENSMUST00000185564 1569 ntBASIC25■■□□□ 1.59
Depdc1aQ8CIG0 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
Depdc1aQ8CIG0 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC25■■□□□ 1.59
Depdc1aQ8CIG0 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Depdc1aQ8CIG0 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Depdc1aQ8CIG0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Depdc1aQ8CIG0 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Depdc1aQ8CIG0 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Depdc1aQ8CIG0 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Depdc1aQ8CIG0 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Depdc1aQ8CIG0 Gm15546-201ENSMUST00000122095 826 ntBASIC24.98■■□□□ 1.59
Depdc1aQ8CIG0 Gm5522-201ENSMUST00000189483 1242 ntBASIC24.98■■□□□ 1.59
Depdc1aQ8CIG0 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC24.98■■□□□ 1.59
Depdc1aQ8CIG0 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Depdc1aQ8CIG0 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC24.97■■□□□ 1.59
Depdc1aQ8CIG0 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC24.97■■□□□ 1.59
Depdc1aQ8CIG0 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
Depdc1aQ8CIG0 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Depdc1aQ8CIG0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC24.96■■□□□ 1.59
Depdc1aQ8CIG0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Depdc1aQ8CIG0 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Depdc1aQ8CIG0 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Depdc1aQ8CIG0 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC24.96■■□□□ 1.59
Depdc1aQ8CIG0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
Depdc1aQ8CIG0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Depdc1aQ8CIG0 Gm6934-201ENSMUST00000194780 1905 ntBASIC24.96■■□□□ 1.59
Depdc1aQ8CIG0 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
Depdc1aQ8CIG0 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Depdc1aQ8CIG0 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
Depdc1aQ8CIG0 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Depdc1aQ8CIG0 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC24.94■■□□□ 1.58
Depdc1aQ8CIG0 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Depdc1aQ8CIG0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Depdc1aQ8CIG0 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC24.93■■□□□ 1.58
Depdc1aQ8CIG0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
Depdc1aQ8CIG0 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Depdc1aQ8CIG0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Depdc1aQ8CIG0 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Depdc1aQ8CIG0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Depdc1aQ8CIG0 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Depdc1aQ8CIG0 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Depdc1aQ8CIG0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC24.92■■□□□ 1.58
Depdc1aQ8CIG0 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC24.92■■□□□ 1.58
Depdc1aQ8CIG0 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Depdc1aQ8CIG0 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Depdc1aQ8CIG0 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Depdc1aQ8CIG0 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Depdc1aQ8CIG0 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC24.91■■□□□ 1.58
Depdc1aQ8CIG0 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Depdc1aQ8CIG0 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
Depdc1aQ8CIG0 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC24.91■■□□□ 1.58
Depdc1aQ8CIG0 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
Depdc1aQ8CIG0 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
Depdc1aQ8CIG0 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Depdc1aQ8CIG0 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
Depdc1aQ8CIG0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
Depdc1aQ8CIG0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Depdc1aQ8CIG0 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Depdc1aQ8CIG0 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
Depdc1aQ8CIG0 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Depdc1aQ8CIG0 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Depdc1aQ8CIG0 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
Depdc1aQ8CIG0 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Depdc1aQ8CIG0 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Depdc1aQ8CIG0 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Depdc1aQ8CIG0 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC24.88■■□□□ 1.57
Depdc1aQ8CIG0 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Depdc1aQ8CIG0 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Depdc1aQ8CIG0 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Depdc1aQ8CIG0 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.57
Depdc1aQ8CIG0 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Depdc1aQ8CIG0 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC24.87■■□□□ 1.57
Depdc1aQ8CIG0 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Depdc1aQ8CIG0 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Depdc1aQ8CIG0 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Depdc1aQ8CIG0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Depdc1aQ8CIG0 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Depdc1aQ8CIG0 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Depdc1aQ8CIG0 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
Depdc1aQ8CIG0 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Depdc1aQ8CIG0 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Depdc1aQ8CIG0 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
Depdc1aQ8CIG0 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
Depdc1aQ8CIG0 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms