Protein–RNA interactions for Protein: Q8CI19

Pdgfc, Platelet-derived growth factor C, mousemouse

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfcQ8CI19 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PdgfcQ8CI19 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PdgfcQ8CI19 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PdgfcQ8CI19 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PdgfcQ8CI19 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC24.56■■□□□ 1.52
PdgfcQ8CI19 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC24.56■■□□□ 1.52
PdgfcQ8CI19 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PdgfcQ8CI19 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC24.55■■□□□ 1.52
PdgfcQ8CI19 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC24.55■■□□□ 1.52
PdgfcQ8CI19 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
PdgfcQ8CI19 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC24.54■■□□□ 1.52
PdgfcQ8CI19 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
PdgfcQ8CI19 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
PdgfcQ8CI19 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC24.53■■□□□ 1.52
PdgfcQ8CI19 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PdgfcQ8CI19 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
PdgfcQ8CI19 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
PdgfcQ8CI19 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC24.52■■□□□ 1.52
PdgfcQ8CI19 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC24.52■■□□□ 1.52
PdgfcQ8CI19 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PdgfcQ8CI19 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PdgfcQ8CI19 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC24.51■■□□□ 1.51
PdgfcQ8CI19 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PdgfcQ8CI19 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PdgfcQ8CI19 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC24.51■■□□□ 1.51
PdgfcQ8CI19 Gm5131-201ENSMUST00000212776 1238 ntBASIC24.5■■□□□ 1.51
PdgfcQ8CI19 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PdgfcQ8CI19 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PdgfcQ8CI19 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
PdgfcQ8CI19 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PdgfcQ8CI19 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC24.49■■□□□ 1.51
PdgfcQ8CI19 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PdgfcQ8CI19 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC24.49■■□□□ 1.51
PdgfcQ8CI19 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
PdgfcQ8CI19 Gm16464-201ENSMUST00000117815 1095 ntBASIC24.48■■□□□ 1.51
PdgfcQ8CI19 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC24.48■■□□□ 1.51
PdgfcQ8CI19 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC24.48■■□□□ 1.51
PdgfcQ8CI19 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
PdgfcQ8CI19 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PdgfcQ8CI19 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
PdgfcQ8CI19 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC24.48■■□□□ 1.51
PdgfcQ8CI19 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
PdgfcQ8CI19 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PdgfcQ8CI19 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
PdgfcQ8CI19 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC24.47■■□□□ 1.51
PdgfcQ8CI19 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC24.47■■□□□ 1.51
PdgfcQ8CI19 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
PdgfcQ8CI19 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
PdgfcQ8CI19 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
PdgfcQ8CI19 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
PdgfcQ8CI19 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
PdgfcQ8CI19 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC24.46■■□□□ 1.51
PdgfcQ8CI19 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.46■■□□□ 1.51
PdgfcQ8CI19 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC24.45■■□□□ 1.51
PdgfcQ8CI19 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC24.45■■□□□ 1.5
PdgfcQ8CI19 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC24.45■■□□□ 1.5
PdgfcQ8CI19 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
PdgfcQ8CI19 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
PdgfcQ8CI19 AC153524.1-201ENSMUST00000220436 1935 ntBASIC24.45■■□□□ 1.5
PdgfcQ8CI19 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
PdgfcQ8CI19 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PdgfcQ8CI19 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
PdgfcQ8CI19 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PdgfcQ8CI19 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC24.44■■□□□ 1.5
PdgfcQ8CI19 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PdgfcQ8CI19 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PdgfcQ8CI19 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC24.44■■□□□ 1.5
PdgfcQ8CI19 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
PdgfcQ8CI19 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
PdgfcQ8CI19 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
PdgfcQ8CI19 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
PdgfcQ8CI19 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
PdgfcQ8CI19 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC24.43■■□□□ 1.5
PdgfcQ8CI19 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC24.43■■□□□ 1.5
PdgfcQ8CI19 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
PdgfcQ8CI19 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
PdgfcQ8CI19 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC24.42■■□□□ 1.5
PdgfcQ8CI19 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
PdgfcQ8CI19 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC24.41■■□□□ 1.5
PdgfcQ8CI19 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PdgfcQ8CI19 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PdgfcQ8CI19 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC24.4■■□□□ 1.5
PdgfcQ8CI19 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
PdgfcQ8CI19 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PdgfcQ8CI19 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
PdgfcQ8CI19 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC24.39■■□□□ 1.49
PdgfcQ8CI19 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC24.39■■□□□ 1.49
PdgfcQ8CI19 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PdgfcQ8CI19 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC24.38■■□□□ 1.49
PdgfcQ8CI19 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PdgfcQ8CI19 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PdgfcQ8CI19 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC24.37■■□□□ 1.49
PdgfcQ8CI19 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PdgfcQ8CI19 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
PdgfcQ8CI19 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
PdgfcQ8CI19 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
PdgfcQ8CI19 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC24.37■■□□□ 1.49
PdgfcQ8CI19 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PdgfcQ8CI19 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
PdgfcQ8CI19 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms