Protein–RNA interactions for Protein: Q8CFL8

Zswim3, Zinc finger SWIM domain-containing protein 3, mousemouse

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zswim3Q8CFL8 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC24.48■■□□□ 1.51
Zswim3Q8CFL8 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Zswim3Q8CFL8 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC24.47■■□□□ 1.51
Zswim3Q8CFL8 Appbp2os-202ENSMUST00000206972 447 ntBASIC24.47■■□□□ 1.51
Zswim3Q8CFL8 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Zswim3Q8CFL8 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Zswim3Q8CFL8 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC24.46■■□□□ 1.51
Zswim3Q8CFL8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC24.46■■□□□ 1.51
Zswim3Q8CFL8 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
Zswim3Q8CFL8 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC24.46■■□□□ 1.51
Zswim3Q8CFL8 Gm12922-201ENSMUST00000120626 809 ntBASIC24.46■■□□□ 1.51
Zswim3Q8CFL8 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC24.46■■□□□ 1.51
Zswim3Q8CFL8 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Zswim3Q8CFL8 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.51
Zswim3Q8CFL8 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Zswim3Q8CFL8 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
Zswim3Q8CFL8 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC24.44■■□□□ 1.5
Zswim3Q8CFL8 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Zswim3Q8CFL8 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Zswim3Q8CFL8 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC24.43■■□□□ 1.5
Zswim3Q8CFL8 Gm40881-201ENSMUST00000223397 166 ntBASIC24.43■■□□□ 1.5
Zswim3Q8CFL8 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Zswim3Q8CFL8 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
Zswim3Q8CFL8 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Zswim3Q8CFL8 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Zswim3Q8CFL8 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Zswim3Q8CFL8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Zswim3Q8CFL8 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC24.41■■□□□ 1.5
Zswim3Q8CFL8 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC24.41■■□□□ 1.5
Zswim3Q8CFL8 AC140930.3-201ENSMUST00000222935 274 ntBASIC24.41■■□□□ 1.5
Zswim3Q8CFL8 Slc35b2-207ENSMUST00000226086 850 ntBASIC24.41■■□□□ 1.5
Zswim3Q8CFL8 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Zswim3Q8CFL8 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Zswim3Q8CFL8 Gm7199-201ENSMUST00000118327 1485 ntBASIC24.4■■□□□ 1.5
Zswim3Q8CFL8 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC24.4■■□□□ 1.5
Zswim3Q8CFL8 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC24.4■■□□□ 1.5
Zswim3Q8CFL8 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Zswim3Q8CFL8 Gm12821-201ENSMUST00000120022 600 ntBASIC24.39■■□□□ 1.49
Zswim3Q8CFL8 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Zswim3Q8CFL8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Zswim3Q8CFL8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Zswim3Q8CFL8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC24.38■■□□□ 1.49
Zswim3Q8CFL8 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Zswim3Q8CFL8 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Zswim3Q8CFL8 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC24.36■■□□□ 1.49
Zswim3Q8CFL8 Gm27454-201ENSMUST00000185090 204 ntBASIC24.36■■□□□ 1.49
Zswim3Q8CFL8 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC24.36■■□□□ 1.49
Zswim3Q8CFL8 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Zswim3Q8CFL8 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC24.35■■□□□ 1.49
Zswim3Q8CFL8 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24.35■■□□□ 1.49
Zswim3Q8CFL8 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Zswim3Q8CFL8 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
Zswim3Q8CFL8 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
Zswim3Q8CFL8 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Zswim3Q8CFL8 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Zswim3Q8CFL8 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
Zswim3Q8CFL8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
Zswim3Q8CFL8 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Zswim3Q8CFL8 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Zswim3Q8CFL8 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
Zswim3Q8CFL8 AC164433.2-201ENSMUST00000226346 1701 ntBASIC24.32■■□□□ 1.48
Zswim3Q8CFL8 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Zswim3Q8CFL8 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC24.32■■□□□ 1.48
Zswim3Q8CFL8 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC24.32■■□□□ 1.48
Zswim3Q8CFL8 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Zswim3Q8CFL8 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC24.32■■□□□ 1.48
Zswim3Q8CFL8 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
Zswim3Q8CFL8 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
Zswim3Q8CFL8 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Zswim3Q8CFL8 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Zswim3Q8CFL8 Gm45417-201ENSMUST00000209533 758 ntBASIC24.3■■□□□ 1.48
Zswim3Q8CFL8 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Zswim3Q8CFL8 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Zswim3Q8CFL8 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
Zswim3Q8CFL8 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Zswim3Q8CFL8 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
Zswim3Q8CFL8 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC24.29■■□□□ 1.48
Zswim3Q8CFL8 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC24.29■■□□□ 1.48
Zswim3Q8CFL8 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Zswim3Q8CFL8 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Zswim3Q8CFL8 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Zswim3Q8CFL8 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC24.28■■□□□ 1.48
Zswim3Q8CFL8 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC24.28■■□□□ 1.48
Zswim3Q8CFL8 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
Zswim3Q8CFL8 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
Zswim3Q8CFL8 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Zswim3Q8CFL8 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Zswim3Q8CFL8 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Zswim3Q8CFL8 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Zswim3Q8CFL8 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Zswim3Q8CFL8 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Zswim3Q8CFL8 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC24.26■■□□□ 1.47
Zswim3Q8CFL8 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
Zswim3Q8CFL8 Gm28536-201ENSMUST00000190971 1317 ntBASIC24.26■■□□□ 1.47
Zswim3Q8CFL8 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
Zswim3Q8CFL8 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC24.25■■□□□ 1.47
Zswim3Q8CFL8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Zswim3Q8CFL8 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC24.25■■□□□ 1.47
Zswim3Q8CFL8 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
Zswim3Q8CFL8 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC24.25■■□□□ 1.47
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms