Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lysmd4Q8CC84 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lysmd4Q8CC84 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lysmd4Q8CC84 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.69■□□□□ 0.74
Lysmd4Q8CC84 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lysmd4Q8CC84 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lysmd4Q8CC84 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Lysmd4Q8CC84 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lysmd4Q8CC84 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lysmd4Q8CC84 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Lysmd4Q8CC84 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Lysmd4Q8CC84 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lysmd4Q8CC84 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lysmd4Q8CC84 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lysmd4Q8CC84 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Lysmd4Q8CC84 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.68■□□□□ 0.74
Lysmd4Q8CC84 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Lysmd4Q8CC84 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Lysmd4Q8CC84 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.68■□□□□ 0.74
Lysmd4Q8CC84 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lysmd4Q8CC84 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Lysmd4Q8CC84 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Lysmd4Q8CC84 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lysmd4Q8CC84 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Lysmd4Q8CC84 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Lysmd4Q8CC84 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.66■□□□□ 0.74
Lysmd4Q8CC84 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Lysmd4Q8CC84 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Lysmd4Q8CC84 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Lysmd4Q8CC84 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.65■□□□□ 0.74
Lysmd4Q8CC84 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Lysmd4Q8CC84 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lysmd4Q8CC84 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lysmd4Q8CC84 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lysmd4Q8CC84 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lysmd4Q8CC84 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.65■□□□□ 0.74
Lysmd4Q8CC84 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Lysmd4Q8CC84 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Lysmd4Q8CC84 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.64■□□□□ 0.73
Lysmd4Q8CC84 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.64■□□□□ 0.73
Lysmd4Q8CC84 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Lysmd4Q8CC84 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.64■□□□□ 0.73
Lysmd4Q8CC84 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.64■□□□□ 0.73
Lysmd4Q8CC84 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lysmd4Q8CC84 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lysmd4Q8CC84 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Lysmd4Q8CC84 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.63■□□□□ 0.73
Lysmd4Q8CC84 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Lysmd4Q8CC84 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC19.63■□□□□ 0.73
Lysmd4Q8CC84 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Lysmd4Q8CC84 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Lysmd4Q8CC84 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lysmd4Q8CC84 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Lysmd4Q8CC84 Gm6821-201ENSMUST00000107540 542 ntBASIC19.62■□□□□ 0.73
Lysmd4Q8CC84 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Lysmd4Q8CC84 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Lysmd4Q8CC84 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lysmd4Q8CC84 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Lysmd4Q8CC84 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.61■□□□□ 0.73
Lysmd4Q8CC84 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lysmd4Q8CC84 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lysmd4Q8CC84 Gm13889-201ENSMUST00000099689 1386 ntBASIC19.61■□□□□ 0.73
Lysmd4Q8CC84 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lysmd4Q8CC84 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Lysmd4Q8CC84 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Lysmd4Q8CC84 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
Lysmd4Q8CC84 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.6■□□□□ 0.73
Lysmd4Q8CC84 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lysmd4Q8CC84 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lysmd4Q8CC84 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Lysmd4Q8CC84 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lysmd4Q8CC84 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Lysmd4Q8CC84 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Lysmd4Q8CC84 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC19.6■□□□□ 0.73
Lysmd4Q8CC84 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.6■□□□□ 0.73
Lysmd4Q8CC84 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lysmd4Q8CC84 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.59■□□□□ 0.73
Lysmd4Q8CC84 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lysmd4Q8CC84 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC19.59■□□□□ 0.73
Lysmd4Q8CC84 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lysmd4Q8CC84 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.59■□□□□ 0.73
Lysmd4Q8CC84 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.58■□□□□ 0.73
Lysmd4Q8CC84 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.58■□□□□ 0.73
Lysmd4Q8CC84 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Lysmd4Q8CC84 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Lysmd4Q8CC84 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Lysmd4Q8CC84 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lysmd4Q8CC84 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lysmd4Q8CC84 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC19.57■□□□□ 0.72
Lysmd4Q8CC84 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lysmd4Q8CC84 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lysmd4Q8CC84 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lysmd4Q8CC84 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.56■□□□□ 0.72
Lysmd4Q8CC84 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lysmd4Q8CC84 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lysmd4Q8CC84 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lysmd4Q8CC84 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lysmd4Q8CC84 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Lysmd4Q8CC84 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Lysmd4Q8CC84 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms