Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Sh3rf2Q8BZT2 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC22.39■■□□□ 1.17
Sh3rf2Q8BZT2 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Sh3rf2Q8BZT2 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Sh3rf2Q8BZT2 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Sh3rf2Q8BZT2 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Sh3rf2Q8BZT2 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sh3rf2Q8BZT2 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sh3rf2Q8BZT2 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Sh3rf2Q8BZT2 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Sh3rf2Q8BZT2 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC22.38■■□□□ 1.17
Sh3rf2Q8BZT2 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Sh3rf2Q8BZT2 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Sh3rf2Q8BZT2 Gm22567-201ENSMUST00000175542 342 ntBASIC22.37■■□□□ 1.17
Sh3rf2Q8BZT2 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Sh3rf2Q8BZT2 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Sh3rf2Q8BZT2 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Sh3rf2Q8BZT2 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Sh3rf2Q8BZT2 AC153524.1-201ENSMUST00000220436 1935 ntBASIC22.36■■□□□ 1.17
Sh3rf2Q8BZT2 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Sh3rf2Q8BZT2 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Sh3rf2Q8BZT2 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC22.36■■□□□ 1.17
Sh3rf2Q8BZT2 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Sh3rf2Q8BZT2 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sh3rf2Q8BZT2 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sh3rf2Q8BZT2 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC22.35■■□□□ 1.17
Sh3rf2Q8BZT2 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sh3rf2Q8BZT2 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sh3rf2Q8BZT2 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Sh3rf2Q8BZT2 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Sh3rf2Q8BZT2 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Sh3rf2Q8BZT2 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC22.35■■□□□ 1.17
Sh3rf2Q8BZT2 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sh3rf2Q8BZT2 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sh3rf2Q8BZT2 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sh3rf2Q8BZT2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Sh3rf2Q8BZT2 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Sh3rf2Q8BZT2 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Sh3rf2Q8BZT2 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Sh3rf2Q8BZT2 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC22.33■■□□□ 1.17
Sh3rf2Q8BZT2 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Sh3rf2Q8BZT2 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Sh3rf2Q8BZT2 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sh3rf2Q8BZT2 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sh3rf2Q8BZT2 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC22.32■■□□□ 1.16
Sh3rf2Q8BZT2 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Sh3rf2Q8BZT2 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC22.32■■□□□ 1.16
Sh3rf2Q8BZT2 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Sh3rf2Q8BZT2 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Sh3rf2Q8BZT2 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Sh3rf2Q8BZT2 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sh3rf2Q8BZT2 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Sh3rf2Q8BZT2 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC22.3■■□□□ 1.16
Sh3rf2Q8BZT2 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Sh3rf2Q8BZT2 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Sh3rf2Q8BZT2 Gm42501-201ENSMUST00000200220 1026 ntBASIC22.3■■□□□ 1.16
Sh3rf2Q8BZT2 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Sh3rf2Q8BZT2 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sh3rf2Q8BZT2 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sh3rf2Q8BZT2 Gm18755-201ENSMUST00000218030 1099 ntBASIC22.29■■□□□ 1.16
Sh3rf2Q8BZT2 Rps24-207ENSMUST00000224568 714 ntBASIC22.29■■□□□ 1.16
Sh3rf2Q8BZT2 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Sh3rf2Q8BZT2 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sh3rf2Q8BZT2 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Sh3rf2Q8BZT2 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Sh3rf2Q8BZT2 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
Sh3rf2Q8BZT2 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Sh3rf2Q8BZT2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Sh3rf2Q8BZT2 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sh3rf2Q8BZT2 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC22.28■■□□□ 1.16
Sh3rf2Q8BZT2 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sh3rf2Q8BZT2 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sh3rf2Q8BZT2 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Sh3rf2Q8BZT2 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Sh3rf2Q8BZT2 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sh3rf2Q8BZT2 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC22.26■■□□□ 1.15
Sh3rf2Q8BZT2 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sh3rf2Q8BZT2 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sh3rf2Q8BZT2 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sh3rf2Q8BZT2 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Sh3rf2Q8BZT2 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sh3rf2Q8BZT2 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sh3rf2Q8BZT2 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sh3rf2Q8BZT2 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Sh3rf2Q8BZT2 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Sh3rf2Q8BZT2 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Sh3rf2Q8BZT2 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sh3rf2Q8BZT2 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Sh3rf2Q8BZT2 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sh3rf2Q8BZT2 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Sh3rf2Q8BZT2 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC22.24■■□□□ 1.15
Sh3rf2Q8BZT2 Gm10232-201ENSMUST00000089221 720 ntBASIC22.24■■□□□ 1.15
Sh3rf2Q8BZT2 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Sh3rf2Q8BZT2 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
Sh3rf2Q8BZT2 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sh3rf2Q8BZT2 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sh3rf2Q8BZT2 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC22.23■■□□□ 1.15
Sh3rf2Q8BZT2 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Sh3rf2Q8BZT2 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Sh3rf2Q8BZT2 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 167.7 ms