Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC21.15■□□□□ 0.98
Cpsf4Q8BQZ5 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Cpsf4Q8BQZ5 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cpsf4Q8BQZ5 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cpsf4Q8BQZ5 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Cpsf4Q8BQZ5 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cpsf4Q8BQZ5 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cpsf4Q8BQZ5 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC21.15■□□□□ 0.98
Cpsf4Q8BQZ5 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cpsf4Q8BQZ5 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.14■□□□□ 0.97
Cpsf4Q8BQZ5 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.14■□□□□ 0.97
Cpsf4Q8BQZ5 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cpsf4Q8BQZ5 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cpsf4Q8BQZ5 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cpsf4Q8BQZ5 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cpsf4Q8BQZ5 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cpsf4Q8BQZ5 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cpsf4Q8BQZ5 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cpsf4Q8BQZ5 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Cpsf4Q8BQZ5 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
Cpsf4Q8BQZ5 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cpsf4Q8BQZ5 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.12■□□□□ 0.97
Cpsf4Q8BQZ5 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Cpsf4Q8BQZ5 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Cpsf4Q8BQZ5 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cpsf4Q8BQZ5 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cpsf4Q8BQZ5 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cpsf4Q8BQZ5 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cpsf4Q8BQZ5 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC21.1■□□□□ 0.97
Cpsf4Q8BQZ5 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cpsf4Q8BQZ5 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cpsf4Q8BQZ5 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cpsf4Q8BQZ5 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cpsf4Q8BQZ5 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cpsf4Q8BQZ5 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Cpsf4Q8BQZ5 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Cpsf4Q8BQZ5 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cpsf4Q8BQZ5 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cpsf4Q8BQZ5 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Cpsf4Q8BQZ5 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC21.09■□□□□ 0.97
Cpsf4Q8BQZ5 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cpsf4Q8BQZ5 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cpsf4Q8BQZ5 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Cpsf4Q8BQZ5 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cpsf4Q8BQZ5 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cpsf4Q8BQZ5 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cpsf4Q8BQZ5 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.08■□□□□ 0.97
Cpsf4Q8BQZ5 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cpsf4Q8BQZ5 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cpsf4Q8BQZ5 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cpsf4Q8BQZ5 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Cpsf4Q8BQZ5 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cpsf4Q8BQZ5 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cpsf4Q8BQZ5 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Cpsf4Q8BQZ5 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cpsf4Q8BQZ5 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21.07■□□□□ 0.96
Cpsf4Q8BQZ5 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Cpsf4Q8BQZ5 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.07■□□□□ 0.96
Cpsf4Q8BQZ5 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cpsf4Q8BQZ5 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cpsf4Q8BQZ5 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.07■□□□□ 0.96
Cpsf4Q8BQZ5 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cpsf4Q8BQZ5 Gm14523-201ENSMUST00000117260 558 ntBASIC21.06■□□□□ 0.96
Cpsf4Q8BQZ5 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cpsf4Q8BQZ5 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.06■□□□□ 0.96
Cpsf4Q8BQZ5 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cpsf4Q8BQZ5 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cpsf4Q8BQZ5 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpsf4Q8BQZ5 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.05■□□□□ 0.96
Cpsf4Q8BQZ5 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpsf4Q8BQZ5 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpsf4Q8BQZ5 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cpsf4Q8BQZ5 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Cpsf4Q8BQZ5 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Cpsf4Q8BQZ5 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC21.04■□□□□ 0.96
Cpsf4Q8BQZ5 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC21.04■□□□□ 0.96
Cpsf4Q8BQZ5 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Cpsf4Q8BQZ5 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cpsf4Q8BQZ5 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.04■□□□□ 0.96
Cpsf4Q8BQZ5 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cpsf4Q8BQZ5 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Cpsf4Q8BQZ5 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cpsf4Q8BQZ5 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Cpsf4Q8BQZ5 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cpsf4Q8BQZ5 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.03■□□□□ 0.96
Cpsf4Q8BQZ5 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cpsf4Q8BQZ5 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Cpsf4Q8BQZ5 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cpsf4Q8BQZ5 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cpsf4Q8BQZ5 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cpsf4Q8BQZ5 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cpsf4Q8BQZ5 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Cpsf4Q8BQZ5 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cpsf4Q8BQZ5 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cpsf4Q8BQZ5 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Cpsf4Q8BQZ5 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
Cpsf4Q8BQZ5 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
Cpsf4Q8BQZ5 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Cpsf4Q8BQZ5 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cpsf4Q8BQZ5 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms