Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Tdp1Q8BJ37 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Tdp1Q8BJ37 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Tdp1Q8BJ37 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
Tdp1Q8BJ37 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Tdp1Q8BJ37 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Tdp1Q8BJ37 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Tdp1Q8BJ37 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Tdp1Q8BJ37 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Tdp1Q8BJ37 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
Tdp1Q8BJ37 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC24.53■■□□□ 1.52
Tdp1Q8BJ37 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Tdp1Q8BJ37 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Tdp1Q8BJ37 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC24.52■■□□□ 1.52
Tdp1Q8BJ37 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Tdp1Q8BJ37 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC24.51■■□□□ 1.51
Tdp1Q8BJ37 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
Tdp1Q8BJ37 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC24.51■■□□□ 1.51
Tdp1Q8BJ37 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Tdp1Q8BJ37 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Tdp1Q8BJ37 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Tdp1Q8BJ37 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Tdp1Q8BJ37 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Tdp1Q8BJ37 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC24.5■■□□□ 1.51
Tdp1Q8BJ37 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Tdp1Q8BJ37 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Tdp1Q8BJ37 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Tdp1Q8BJ37 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC24.49■■□□□ 1.51
Tdp1Q8BJ37 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Tdp1Q8BJ37 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Tdp1Q8BJ37 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Tdp1Q8BJ37 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Tdp1Q8BJ37 AC153524.1-201ENSMUST00000220436 1935 ntBASIC24.49■■□□□ 1.51
Tdp1Q8BJ37 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Tdp1Q8BJ37 Gm16464-201ENSMUST00000117815 1095 ntBASIC24.48■■□□□ 1.51
Tdp1Q8BJ37 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC24.48■■□□□ 1.51
Tdp1Q8BJ37 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC24.47■■□□□ 1.51
Tdp1Q8BJ37 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Tdp1Q8BJ37 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Tdp1Q8BJ37 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Tdp1Q8BJ37 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Tdp1Q8BJ37 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
Tdp1Q8BJ37 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Tdp1Q8BJ37 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC24.46■■□□□ 1.51
Tdp1Q8BJ37 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC24.46■■□□□ 1.51
Tdp1Q8BJ37 Gm5131-201ENSMUST00000212776 1238 ntBASIC24.46■■□□□ 1.51
Tdp1Q8BJ37 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC24.46■■□□□ 1.51
Tdp1Q8BJ37 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Tdp1Q8BJ37 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC24.46■■□□□ 1.51
Tdp1Q8BJ37 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Tdp1Q8BJ37 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
Tdp1Q8BJ37 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Tdp1Q8BJ37 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Tdp1Q8BJ37 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC24.45■■□□□ 1.51
Tdp1Q8BJ37 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Tdp1Q8BJ37 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Tdp1Q8BJ37 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC24.45■■□□□ 1.5
Tdp1Q8BJ37 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC24.45■■□□□ 1.5
Tdp1Q8BJ37 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Tdp1Q8BJ37 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Tdp1Q8BJ37 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
Tdp1Q8BJ37 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC24.44■■□□□ 1.5
Tdp1Q8BJ37 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC24.44■■□□□ 1.5
Tdp1Q8BJ37 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC24.44■■□□□ 1.5
Tdp1Q8BJ37 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC24.44■■□□□ 1.5
Tdp1Q8BJ37 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Tdp1Q8BJ37 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Tdp1Q8BJ37 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Tdp1Q8BJ37 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC24.43■■□□□ 1.5
Tdp1Q8BJ37 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC24.43■■□□□ 1.5
Tdp1Q8BJ37 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Tdp1Q8BJ37 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Tdp1Q8BJ37 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Tdp1Q8BJ37 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Tdp1Q8BJ37 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC24.43■■□□□ 1.5
Tdp1Q8BJ37 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Tdp1Q8BJ37 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Tdp1Q8BJ37 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC24.42■■□□□ 1.5
Tdp1Q8BJ37 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC24.42■■□□□ 1.5
Tdp1Q8BJ37 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Tdp1Q8BJ37 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Tdp1Q8BJ37 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Tdp1Q8BJ37 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC24.41■■□□□ 1.5
Tdp1Q8BJ37 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC24.41■■□□□ 1.5
Tdp1Q8BJ37 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Tdp1Q8BJ37 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Tdp1Q8BJ37 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Tdp1Q8BJ37 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Tdp1Q8BJ37 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Tdp1Q8BJ37 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Tdp1Q8BJ37 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC24.39■■□□□ 1.49
Tdp1Q8BJ37 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC24.39■■□□□ 1.49
Tdp1Q8BJ37 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Tdp1Q8BJ37 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Tdp1Q8BJ37 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Tdp1Q8BJ37 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC24.38■■□□□ 1.49
Tdp1Q8BJ37 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
Tdp1Q8BJ37 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Tdp1Q8BJ37 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Tdp1Q8BJ37 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC24.38■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms