Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Tdp1Q8BJ37 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Tdp1Q8BJ37 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Tdp1Q8BJ37 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
Tdp1Q8BJ37 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Tdp1Q8BJ37 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Tdp1Q8BJ37 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Tdp1Q8BJ37 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Tdp1Q8BJ37 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Tdp1Q8BJ37 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
Tdp1Q8BJ37 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC24.53■■□□□ 1.52
Tdp1Q8BJ37 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Tdp1Q8BJ37 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Tdp1Q8BJ37 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC24.52■■□□□ 1.52
Tdp1Q8BJ37 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Tdp1Q8BJ37 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC24.51■■□□□ 1.51
Tdp1Q8BJ37 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
Tdp1Q8BJ37 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC24.51■■□□□ 1.51
Tdp1Q8BJ37 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Tdp1Q8BJ37 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Tdp1Q8BJ37 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Tdp1Q8BJ37 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Tdp1Q8BJ37 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Tdp1Q8BJ37 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC24.5■■□□□ 1.51
Tdp1Q8BJ37 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Tdp1Q8BJ37 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Tdp1Q8BJ37 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Tdp1Q8BJ37 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC24.49■■□□□ 1.51
Tdp1Q8BJ37 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Tdp1Q8BJ37 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Tdp1Q8BJ37 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Tdp1Q8BJ37 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Tdp1Q8BJ37 AC153524.1-201ENSMUST00000220436 1935 ntBASIC24.49■■□□□ 1.51
Tdp1Q8BJ37 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Tdp1Q8BJ37 Gm16464-201ENSMUST00000117815 1095 ntBASIC24.48■■□□□ 1.51
Tdp1Q8BJ37 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC24.48■■□□□ 1.51
Tdp1Q8BJ37 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC24.47■■□□□ 1.51
Tdp1Q8BJ37 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Tdp1Q8BJ37 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Tdp1Q8BJ37 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Tdp1Q8BJ37 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Tdp1Q8BJ37 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
Tdp1Q8BJ37 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Tdp1Q8BJ37 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC24.46■■□□□ 1.51
Tdp1Q8BJ37 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC24.46■■□□□ 1.51
Tdp1Q8BJ37 Gm5131-201ENSMUST00000212776 1238 ntBASIC24.46■■□□□ 1.51
Tdp1Q8BJ37 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC24.46■■□□□ 1.51
Tdp1Q8BJ37 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Tdp1Q8BJ37 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC24.46■■□□□ 1.51
Tdp1Q8BJ37 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Tdp1Q8BJ37 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
Tdp1Q8BJ37 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Tdp1Q8BJ37 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Tdp1Q8BJ37 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC24.45■■□□□ 1.51
Tdp1Q8BJ37 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Tdp1Q8BJ37 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Tdp1Q8BJ37 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC24.45■■□□□ 1.5
Tdp1Q8BJ37 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC24.45■■□□□ 1.5
Tdp1Q8BJ37 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Tdp1Q8BJ37 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Tdp1Q8BJ37 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
Tdp1Q8BJ37 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC24.44■■□□□ 1.5
Tdp1Q8BJ37 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC24.44■■□□□ 1.5
Tdp1Q8BJ37 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC24.44■■□□□ 1.5
Tdp1Q8BJ37 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC24.44■■□□□ 1.5
Tdp1Q8BJ37 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Tdp1Q8BJ37 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Tdp1Q8BJ37 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Tdp1Q8BJ37 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC24.43■■□□□ 1.5
Tdp1Q8BJ37 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC24.43■■□□□ 1.5
Tdp1Q8BJ37 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Tdp1Q8BJ37 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Tdp1Q8BJ37 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Tdp1Q8BJ37 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Tdp1Q8BJ37 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC24.43■■□□□ 1.5
Tdp1Q8BJ37 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
Tdp1Q8BJ37 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Tdp1Q8BJ37 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC24.42■■□□□ 1.5
Tdp1Q8BJ37 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC24.42■■□□□ 1.5
Tdp1Q8BJ37 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Tdp1Q8BJ37 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Tdp1Q8BJ37 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Tdp1Q8BJ37 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC24.41■■□□□ 1.5
Tdp1Q8BJ37 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC24.41■■□□□ 1.5
Tdp1Q8BJ37 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Tdp1Q8BJ37 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Tdp1Q8BJ37 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC24.41■■□□□ 1.5
Tdp1Q8BJ37 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Tdp1Q8BJ37 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Tdp1Q8BJ37 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
Tdp1Q8BJ37 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC24.39■■□□□ 1.49
Tdp1Q8BJ37 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC24.39■■□□□ 1.49
Tdp1Q8BJ37 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
Tdp1Q8BJ37 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Tdp1Q8BJ37 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Tdp1Q8BJ37 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC24.38■■□□□ 1.49
Tdp1Q8BJ37 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
Tdp1Q8BJ37 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Tdp1Q8BJ37 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Tdp1Q8BJ37 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC24.38■■□□□ 1.49
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms