Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC25.41■■□□□ 1.66
Trnp1Q80ZI1 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
Trnp1Q80ZI1 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC25.41■■□□□ 1.66
Trnp1Q80ZI1 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Trnp1Q80ZI1 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC25.4■■□□□ 1.66
Trnp1Q80ZI1 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Trnp1Q80ZI1 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Trnp1Q80ZI1 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC25.39■■□□□ 1.66
Trnp1Q80ZI1 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Trnp1Q80ZI1 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Trnp1Q80ZI1 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Trnp1Q80ZI1 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Trnp1Q80ZI1 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Trnp1Q80ZI1 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC25.37■■□□□ 1.65
Trnp1Q80ZI1 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC25.37■■□□□ 1.65
Trnp1Q80ZI1 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC25.37■■□□□ 1.65
Trnp1Q80ZI1 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC25.37■■□□□ 1.65
Trnp1Q80ZI1 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
Trnp1Q80ZI1 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Trnp1Q80ZI1 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Trnp1Q80ZI1 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Trnp1Q80ZI1 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Trnp1Q80ZI1 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Trnp1Q80ZI1 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Trnp1Q80ZI1 Gm40881-201ENSMUST00000223397 166 ntBASIC25.35■■□□□ 1.65
Trnp1Q80ZI1 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Trnp1Q80ZI1 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Trnp1Q80ZI1 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
Trnp1Q80ZI1 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC25.34■■□□□ 1.65
Trnp1Q80ZI1 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC25.34■■□□□ 1.65
Trnp1Q80ZI1 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Trnp1Q80ZI1 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Trnp1Q80ZI1 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC25.33■■□□□ 1.65
Trnp1Q80ZI1 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC25.33■■□□□ 1.65
Trnp1Q80ZI1 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Trnp1Q80ZI1 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Trnp1Q80ZI1 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Trnp1Q80ZI1 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Trnp1Q80ZI1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC25.31■■□□□ 1.64
Trnp1Q80ZI1 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Trnp1Q80ZI1 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.31■■□□□ 1.64
Trnp1Q80ZI1 Gm28536-201ENSMUST00000190971 1317 ntBASIC25.31■■□□□ 1.64
Trnp1Q80ZI1 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
Trnp1Q80ZI1 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC25.31■■□□□ 1.64
Trnp1Q80ZI1 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Trnp1Q80ZI1 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Trnp1Q80ZI1 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Trnp1Q80ZI1 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC25.3■■□□□ 1.64
Trnp1Q80ZI1 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Trnp1Q80ZI1 Gm12922-201ENSMUST00000120626 809 ntBASIC25.29■■□□□ 1.64
Trnp1Q80ZI1 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
Trnp1Q80ZI1 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Trnp1Q80ZI1 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Trnp1Q80ZI1 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC25.28■■□□□ 1.64
Trnp1Q80ZI1 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC25.28■■□□□ 1.64
Trnp1Q80ZI1 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC25.28■■□□□ 1.64
Trnp1Q80ZI1 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Trnp1Q80ZI1 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Trnp1Q80ZI1 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Trnp1Q80ZI1 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Trnp1Q80ZI1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
Trnp1Q80ZI1 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Trnp1Q80ZI1 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
Trnp1Q80ZI1 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC25.27■■□□□ 1.64
Trnp1Q80ZI1 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC25.27■■□□□ 1.64
Trnp1Q80ZI1 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC25.27■■□□□ 1.64
Trnp1Q80ZI1 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Trnp1Q80ZI1 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Trnp1Q80ZI1 Fezf2-202ENSMUST00000224023 1917 ntBASIC25.26■■□□□ 1.63
Trnp1Q80ZI1 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC25.26■■□□□ 1.63
Trnp1Q80ZI1 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC25.26■■□□□ 1.63
Trnp1Q80ZI1 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Trnp1Q80ZI1 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC25.25■■□□□ 1.63
Trnp1Q80ZI1 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC25.25■■□□□ 1.63
Trnp1Q80ZI1 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Trnp1Q80ZI1 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC25.25■■□□□ 1.63
Trnp1Q80ZI1 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
Trnp1Q80ZI1 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Trnp1Q80ZI1 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Trnp1Q80ZI1 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Trnp1Q80ZI1 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Trnp1Q80ZI1 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Trnp1Q80ZI1 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Trnp1Q80ZI1 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Trnp1Q80ZI1 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Trnp1Q80ZI1 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC25.24■■□□□ 1.63
Trnp1Q80ZI1 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC25.24■■□□□ 1.63
Trnp1Q80ZI1 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Trnp1Q80ZI1 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC25.23■■□□□ 1.63
Trnp1Q80ZI1 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
Trnp1Q80ZI1 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Trnp1Q80ZI1 Appbp2os-202ENSMUST00000206972 447 ntBASIC25.22■■□□□ 1.63
Trnp1Q80ZI1 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Trnp1Q80ZI1 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Trnp1Q80ZI1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Trnp1Q80ZI1 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC25.21■■□□□ 1.63
Trnp1Q80ZI1 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Trnp1Q80ZI1 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Trnp1Q80ZI1 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
Trnp1Q80ZI1 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC25.2■■□□□ 1.62
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms