Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Lrrtm4Q80XG9 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lrrtm4Q80XG9 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.41■■□□□ 1.02
Lrrtm4Q80XG9 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.41■■□□□ 1.02
Lrrtm4Q80XG9 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Lrrtm4Q80XG9 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lrrtm4Q80XG9 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Lrrtm4Q80XG9 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Lrrtm4Q80XG9 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Lrrtm4Q80XG9 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lrrtm4Q80XG9 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lrrtm4Q80XG9 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lrrtm4Q80XG9 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Lrrtm4Q80XG9 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Lrrtm4Q80XG9 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Lrrtm4Q80XG9 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Lrrtm4Q80XG9 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Lrrtm4Q80XG9 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Lrrtm4Q80XG9 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lrrtm4Q80XG9 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Lrrtm4Q80XG9 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
Lrrtm4Q80XG9 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lrrtm4Q80XG9 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lrrtm4Q80XG9 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lrrtm4Q80XG9 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Lrrtm4Q80XG9 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.37■■□□□ 1.01
Lrrtm4Q80XG9 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.37■■□□□ 1.01
Lrrtm4Q80XG9 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lrrtm4Q80XG9 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Lrrtm4Q80XG9 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lrrtm4Q80XG9 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.36■■□□□ 1.01
Lrrtm4Q80XG9 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.36■■□□□ 1.01
Lrrtm4Q80XG9 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Lrrtm4Q80XG9 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lrrtm4Q80XG9 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lrrtm4Q80XG9 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.36■■□□□ 1.01
Lrrtm4Q80XG9 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Lrrtm4Q80XG9 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lrrtm4Q80XG9 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Lrrtm4Q80XG9 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lrrtm4Q80XG9 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.35■■□□□ 1.01
Lrrtm4Q80XG9 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Lrrtm4Q80XG9 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lrrtm4Q80XG9 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Lrrtm4Q80XG9 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Lrrtm4Q80XG9 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.34■■□□□ 1.01
Lrrtm4Q80XG9 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Lrrtm4Q80XG9 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.33■■□□□ 1.01
Lrrtm4Q80XG9 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Lrrtm4Q80XG9 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Lrrtm4Q80XG9 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Lrrtm4Q80XG9 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Lrrtm4Q80XG9 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Lrrtm4Q80XG9 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Lrrtm4Q80XG9 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.33■■□□□ 1
Lrrtm4Q80XG9 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Lrrtm4Q80XG9 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Lrrtm4Q80XG9 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Lrrtm4Q80XG9 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Lrrtm4Q80XG9 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.32■■□□□ 1
Lrrtm4Q80XG9 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.32■■□□□ 1
Lrrtm4Q80XG9 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.32■■□□□ 1
Lrrtm4Q80XG9 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Lrrtm4Q80XG9 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Lrrtm4Q80XG9 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Lrrtm4Q80XG9 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Lrrtm4Q80XG9 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.31■■□□□ 1
Lrrtm4Q80XG9 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.31■■□□□ 1
Lrrtm4Q80XG9 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.31■■□□□ 1
Lrrtm4Q80XG9 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.31■■□□□ 1
Lrrtm4Q80XG9 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Lrrtm4Q80XG9 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.3■■□□□ 1
Lrrtm4Q80XG9 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Lrrtm4Q80XG9 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Lrrtm4Q80XG9 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Lrrtm4Q80XG9 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.3■■□□□ 1
Lrrtm4Q80XG9 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Lrrtm4Q80XG9 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Lrrtm4Q80XG9 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Lrrtm4Q80XG9 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.29■■□□□ 1
Lrrtm4Q80XG9 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.29■■□□□ 1
Lrrtm4Q80XG9 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Lrrtm4Q80XG9 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.29■■□□□ 1
Lrrtm4Q80XG9 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.29■■□□□ 1
Lrrtm4Q80XG9 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Lrrtm4Q80XG9 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Lrrtm4Q80XG9 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lrrtm4Q80XG9 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.28■■□□□ 1
Lrrtm4Q80XG9 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Lrrtm4Q80XG9 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Lrrtm4Q80XG9 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lrrtm4Q80XG9 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Lrrtm4Q80XG9 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lrrtm4Q80XG9 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lrrtm4Q80XG9 Gm45444-201ENSMUST00000211394 898 ntBASIC21.27■■□□□ 1
Lrrtm4Q80XG9 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
Lrrtm4Q80XG9 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.27■■□□□ 1
Lrrtm4Q80XG9 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Lrrtm4Q80XG9 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Lrrtm4Q80XG9 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms